Ziziphus jujuba (Chinese jujube): 107430249
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Entry
107430249 CDS
T04794
Name
(RefSeq) deoxyribodipyrimidine photo-lyase isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zju03400
]
107430249
Enzymes [BR:
zju01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
107430249
DNA repair and recombination proteins [BR:
zju03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
107430249
Prokaryotic type
107430249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
107430249
NCBI-ProteinID:
XP_048319735
LinkDB
All DBs
Position
6:complement(join(24449466..24449620,24449693..24449747,24449891..24449962,24450586..24450667,24451299..24451357,24451621..24451654,24451752..24451909,24452079..24452319,24452444..24452784,24452915..24453226))
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AA seq
502 aa
AA seq
DB search
MAVSSTTVQPGRIRVLKQGLKPYSKNLGPVVYWMFRDQRVRDNWALIHAVEQANKSNVPV
VVAFNLFDQFLGAKARHLGFMLRGLRKVNLLLEETLQIPFFLFRGEAEDTIPNFVRECGA
SLLVTDFSPLREIRKFKDEICKRVSDSVTVHEVDAHNVVPTWVSSEKLEYGARTIRSKIN
KMLPEYLIDFPTLNPPIAKWSSTTQVIDWDAIIAEVLRKGSEVPEISWCEPGEEAGVELL
MGSKDGFLTKRLKNYSADRNNPLKPRGLSGLSPYLHFGQISAQRCALEARNVRKLCPQSV
DAFLEELVVRRELADNFCFYQPHYDSLEGAWEWARKTLLDHASDKREHLYTDQLEKAQTA
DPLWNASQLEMVYHGKMHGFMRMYWAKKILEWTKGPEEALEISIYLNNKYEIDGRDPCGY
VGCMWSICGIHDQSWNLQQIQTLEWNGSFPIVFGKIRYMNYAGCKRKFDVDGYIAYVKRL
VGEMKKRKAEDLSSRKLKELRR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcagctccaccaccgttcaacctggtcggatcagggttcttaaacaaggtttg
aagccgtacagtaagaatttgggtcccgtagtttactggatgttcagagatcaaagggtc
agagacaattgggctttaatccacgccgttgagcaggccaacaaatccaatgtccctgtt
gtcgttgcgttcaatctgttcgatcaatttttgggcgccaaagctcggcatttagggttt
atgttgaggggtttgcgaaaagttaatctgttgctcgaagaaacccttcaaatcccattt
ttcttgttccggggagaagctgaagataccattccgaactttgtgagagaatgtggggct
tcgcttttggttacagacttttcgcctctacgggaaattcggaaatttaaggacgaaatt
tgcaagagggttagtgattctgtgaccgtgcatgaagttgatgcacataatgttgtaccc
acttgggtttcatctgagaaattggagtatggtgctcggactataaggagtaagataaac
aagatgcttccagagtacctcattgattttcctacattgaatccaccaattgcaaaatgg
agttctacaactcaagtgattgactgggatgccataattgcggaagttttgagaaaaggg
tcagaagttcctgaaatttcatggtgtgaaccaggagaagaggctggagtggaacttttg
atgggtagtaaagatgggtttttgacgaaaaggctgaagaattactcagcagacagaaat
aaccctttgaaacccagaggactttctggcctgtcaccatatttgcattttggccagata
tctgcacagaggtgtgccttagaggctcgtaatgtccggaaactctgtcctcagtcagtt
gatgcgtttctagaggagctggttgtgcgaagggaacttgctgataacttctgcttctac
cagcctcattatgattcgttagaaggggcttgggaatgggcacgcaagacattgttggac
catgcttctgataagcgcgaacatctctacacggatcaactggagaaggcacaaacagct
gatcctctatggaatgcttcccagttggagatggtttaccatggaaagatgcatggattt
atgcggatgtattgggcgaaaaagattcttgagtggacaaaaggaccagaagaagctctt
gagatatctatatatttaaataacaagtatgaaatagatgggagggatccatgtggatat
gtgggttgcatgtggtcaatatgcggcattcacgaccagtcctggaatctacaacagata
cagacattggaatggaatggttcgtttccgatagtatttggaaaaatacgttatatgaac
tatgcaggatgcaaaaggaaatttgatgtggatggttatattgcatatgtcaagaggctt
gtgggtgaaatgaagaagagaaaagcagaagacttatcgagtagaaagttgaaggaactc
cgtagatag
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integrated database retrieval system
