KEGG   Ziziphus jujuba (Chinese jujube): 107430354
Entry
107430354         CDS       T04794                                 
Name
(RefSeq) DNA repair endonuclease UVH1 isoform X1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03420  Nucleotide excision repair
zju03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    107430354
   03460 Fanconi anemia pathway
    107430354
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:zju03032]
    107430354
   03400 DNA repair and recombination proteins [BR:zju03400]
    107430354
DNA replication proteins [BR:zju03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    107430354
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     107430354
SSDB
Motif
Pfam: ERCC4 DUF4469
Other DBs
NCBI-GeneID: 107430354
NCBI-ProteinID: XP_015896676
UniProt: A0A6P4BCI4
LinkDB
Position
6:join(16067099..16067952,16068254..16068471,16068663..16068751,16069014..16069178,16069660..16070445,16070677..16070787,16070867..16071127,16071227..16071450,16071534..16071744)
AA seq 972 aa
MVQFHEHIISELLEEPPNGSGLVILSSGLSLSKLISSLLLLHSPSQGTLLLLSPPSSSSL
KSQILHYHPHIEEITADLPSHHRLSLYTSGSAFFITARILIVDLLTSKIPTSSIAGIILL
TAHSLSETSTEAFIVRIFRSLNRNAYVRAFSDKPHAMVSGFSKTERIMKCLYIKRLHLWP
RFQVYVSQELEKDPPQVVDIRVPMTKSMLGIQKAIVEVMDACLKEMRKTNKVDVEDLTVE
NGLFKSFDEIVRRQLDPIWHMLGKKTKQLVSDLKTLRKLLDYLDRYDAVTYLKYLDTLRV
SESFRSVWIFAESSYKIFEYAKKRVYRFVKSDGTKLSDMGKSSTGKKRKLKGDNDKGETD
SSSSSNTNISIVLDEVLEEAPKWKVLREILEEIEEEILKQASGGEELLVGGEEDNSGIVL
VACKDERSCMQLEECLTNGPQKVMREEWEKYLLGKVELRDLQTRYKKKPKDPKGFGILDG
VVPIAPAKKNVEPSSINKQEHDALVAAASEIRNRVKSDDVVGDDAQPESSSKGKGKGKAR
NKKGPTSSRSNRNKNNGSKTASIDESGSEDEVDTSVAGGSCEAACQDESTDKGVLRKHTQ
VADATGSGIAKPLPPVHFYALESGQPILDILKPSVIIVYHPDMTFVREIEVHRAENPSKK
LKVYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSMMMIPVDQDGNCLGLNSSVEPRGT
LSQNSITRKAGGRREVEKETQVIVDMREFMSSLPNVLHQKGMRIIPVTLEVGDYILSPLI
CVERKSIQDLFMSFTSGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASDIGDDVTPN
NIISKLSLLVLHFPRLRIIWSRSLHATAEIFASLKANQDEPDETKAMRVGVPSEEGIVEN
DVRAENYNTSAVEFLRRLPGVNDSNYRAIMDGCKSLSELALLPIERLAEIMGGQKAAQTL
RDFLDAKYPTLL
NT seq 2919 nt   +upstreamnt  +downstreamnt
atggttcaattccacgagcacataatatcagagcttctcgaagagcctccaaatggaagc
ggcctagtgattctttcttccggtctctctctctccaagctcatctcctctctcctcctc
cttcactctccttcccaaggtactctcctccttctctctcctccctcttcctcttccctc
aaatcccaaatcctccattaccacccccacatcgaagaaatcaccgccgaccttccatcc
caccaccgtctctccctctacacctccggttccgccttcttcatcaccgcacgaattcta
atcgtcgatctcctcacctccaaaatacccacttcctctatcgccggtattatcctcctc
accgctcattctctctccgaaacctccaccgaagcttttatcgtcaggatttttcggtcc
ctgaatcggaatgcctatgttcgagctttttccgataagccgcacgcgatggtttctggg
ttttcgaagaccgagaggattatgaagtgtttgtatataaaaaggttgcatctatggccg
aggtttcaggtttatgtgtcgcaggaattggaaaaggatccgcctcaggttgtggatatt
agggttccgatgacgaaatccatgctgggtattcagaaggctatcgttgaggttatggat
gcttgcttgaaggagatgaggaagaccaataaggttgatgtggaggatttgacggtcgag
aatggtttgttcaagtcttttgatgagattgtgaggaggcaattggaccccatttggcat
atgctggggaagaagaccaagcagcttgtttccgacttgaagactctgaggaaactcctg
gattatcttgaccggtatgatgcagtaacttatttgaagtatttggatacactgagagtg
tcggagagttttcggtccgtgtggatttttgctgaatcaagctataagatatttgagtat
gcaaagaaaagggtttatcgttttgtcaagtctgatggtaccaaattgagtgacatggga
aagagttctacaggcaaaaagaggaaactaaagggcgataatgataaaggagaaactgac
agctcttcatcgtcaaatacaaacatttcaatagttttggatgaagttttagaggaagca
ccaaaatggaaggtcttacgtgagatccttgaagagatagaagaggaaatactaaagcaa
gcttcgggtggagaagagctcctggtaggaggtgaagaggacaacagtggcattgttctt
gtggcatgcaaagatgaacgttcatgcatgcagcttgaagaatgcttgacaaatggtcca
caaaaggtcatgcgagaagaatgggaaaagtacttgcttggaaaagtagagctgcgtgat
ctgcaaacacgttataaaaagaaaccaaaggatcccaaaggttttgggattctcgatgga
gttgttcctatagcacctgcaaaaaagaatgttgaacctagtagtataaacaagcaggaa
catgatgcactagtggctgctgcatcagaaattagaaatcgagttaaaagtgatgatgtt
gttggagatgatgctcagcctgagtctagtagtaaaggtaaaggaaagggaaaagcaagg
aacaaaaaaggcccaactagcagtaggagtaacaggaacaaaaataacggtagtaagaca
gcttcaatagatgaatctggttcagaagatgaagtggatacatcagttgctggtggatct
tgtgaagccgcatgccaagatgaatccacagacaaaggggttttacggaagcatactcaa
gtggcagatgctacaggatctggaattgctaaaccactacctccagtgcacttttatgct
ctagaaagtggtcagcctatacttgacattttgaagccttctgtaattattgtctatcat
ccagacatgacgtttgttagggaaatcgaagtgcatagagctgagaacccctcaaagaag
ttgaaagtatattttcttttctatgaagattctacagaggtgcaaaagtttgaggcaagc
atacgcagggagaatggagcattcgaatcgctaattaggcagaaatcaatgatgatgatc
ccagttgatcaggatgggaactgcttaggattaaattcttctgtagagccacgaggtaca
ttgtcccaaaactcaataaccagaaaggcagggggaagaagggaagttgagaaagaaaca
caggtcatagtagacatgcgggagttcatgagcagccttccaaatgttcttcaccagaag
ggcatgcgcataataccggtgaccctagaagttggggattatatcctttcaccattaata
tgtgtggaaaggaagagtatccaagatctttttatgagcttcacatcaggtcgtctttac
caccaagtggaaacaatggttcgctattatagaatacctgttctcctgatcgagttctca
caggataaaagcttttcgtttcagtctgctagtgatattggtgatgatgttacgccaaac
aatatcatatctaaactgtcattacttgttcttcatttcccccgcctgcgtatcatctgg
tctcgcagtctgcatgctacggctgaaatatttgcttcacttaaagcaaatcaggatgaa
cctgatgagactaaggcaatgagagttggtgttccatccgaagagggtattgttgaaaac
gatgtgagagctgaaaattacaatacatctgcagtggagtttttgagacgtcttcctggt
gttaatgattcaaactacagagccatcatggatggttgtaagagcttgtcagaactcgct
ctacttcccatagagaggctggccgaaataatgggcggtcagaaagctgctcagacactg
agagacttccttgatgcaaaatatccaaccttattatga

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