KEGG   Ziziphus jujuba (Chinese jujube): 107430841
Entry
107430841         CDS       T04794                                 
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1
  KO
K18998  RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:zju01009]
    107430841
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zju03021]
    107430841
Enzymes [BR:zju01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     107430841
Protein phosphatases and associated proteins [BR:zju01009]
 HAD phosphatases
  Fcp/Scp phosphatases
   107430841
Transcription machinery [BR:zju03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     107430841
SSDB
Motif
Pfam: NIF dsrm DSRM_2
Other DBs
NCBI-GeneID: 107430841
NCBI-ProteinID: XP_015897198
UniProt: A0A6P4APA8
LinkDB
Position
6:join(11277723..11277992,11278158..11278628,11279376..11279586,11279956..11280113,11280215..11280285,11280369..11280474,11280579..11280668,11280846..11280987,11281105..11281469,11281606..11281663,11282621..11282754,11282827..11282880,11283302..11283398,11284029..11284189,11284842..11284921,11285173..11285245)
AA seq 846 aa
MNRLGFKSVVYHGDLCLGELDVIPATDQNFQFPNNEIRIHHISPQSERCPPLSILQTISS
FSVRCKLESSLPVEQPHLIRLHASCFYEFKTAVVLVGDEEIHLVAMPSKQKKFPCFWCYS
VPGGLYNASLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRGWIERETDPLRLSGM
SAELKRYIDDRALLKQYAEGDSVMDNGKLLKVQLEEVPPVSDNHEKIVRPVIRLQEKNIV
LTRINPEIRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPGA
HLIGSKQLLDRVVCVKSGSRKSLTSVFQDGMCHSKMAMVIDDRSKVWEDKDQPRVHVVPA
FTPYYAPQAETANAVPVLCVARNVACNVRGYFFKEFDENLLRRISEIFYEDDVMNLPPSP
DVSNYLMSEDAGFVPNGNTNAPISEGINGVEVEQRLNQPDDRHVIDLTAHSMTNNVELRS
GTLQSPVAIFPNATGPASVRPLMPSQKPGLLGPPVRRDSFSDRDYDMKRGLLPMKHIDLR
NQSVGEPPLLSRLPTQPSATAVQAQGGWLVEDDVNKGHLNNRSSGLIKESDALRSDRQRA
HQNSSSYTTPVPAAPSLFSQTSEVKSEEVYSGHDLQKQNLPQASPPLDAGVSKDQAPSYS
RESQPEAGKANPLPSPLSIGVLQEIARRCCSKVEFRSVLSTSKDLQFSVEVLFTGEKIGV
GMGKTRKDAQQQAAENALHSLAEKYVAYVAPRSAAVDKDFDKLSLENDNGFLFDIIDPGS
TELLKEDELPKESAPEAAEVEHQRASSPAVVNHQVQKRANSPRLPQSVSNKRSKEELHRI
SQNLSS
NT seq 2541 nt   +upstreamnt  +downstreamnt
atgaatcgtttagggtttaaatccgtggtctatcacggcgacttgtgtttgggagaactt
gatgtaattccggcgacggaccaaaatttccagttcccaaacaacgagattcgtatccat
cacatatcgccacagagcgaacgatgccctcctctttcaattctccaaacaatttcttcg
ttttctgttcgttgcaagctcgaatcttctttgcctgttgaacagcctcatttgatccgt
ctacatgcctcttgtttctacgaattcaagacggcggtagtattggttggagacgaagag
attcacttagtggctatgcccagtaagcagaagaagtttccttgcttttggtgctattcg
gttccggggggtttatacaatgcttccttaggaatgctgaatctgcggtgcctcgcaatc
gtattcgatcttgatgagacgctaattgttgcgaacaccatgaaatctttcgaggataga
atcgaggctctacgaggttggattgagcgggagactgatccactgcgtctatctggaatg
tctgctgaactaaagcggtacattgatgatcgagcgctgttgaagcagtatgcggagggt
gattctgtcatggataatggaaagttgttgaaggttcaacttgaagaggttcctccagtt
tccgataaccatgagaaaattgtccggcctgtaattagattgcaagagaaaaatattgtt
ctcactcgaatcaatcccgagatccgtgatactagtgtgcttgtgaggttgcgacctgca
tgggaagatttgagaagttatctaacagcaaaaggacgaaaaaggtttgaagtttatgtt
tgtaccatggctgaaagagattatgccttagaaatgtggagacttcttgaccctggcgca
catctgataggttcaaagcaactcctagaccgtgttgtttgtgtcaaatcaggatccagg
aaatctttaactagtgtcttccaagatggtatgtgccattcgaagatggcaatggttatt
gatgaccgttcgaaggtttgggaagataaggatcaacctcgtgttcatgtagttccagca
ttcactccttactatgctcctcaggcggagacagcaaatgctgttcccgtcctctgtgta
gcaagaaatgttgcatgcaatgtcagaggttattttttcaaagaatttgatgagaattta
ttgcgaaggatctctgaaattttttatgaggatgatgtgatgaatttacctccctctcct
gatgtgagcaactacttaatgtcagaggatgctggttttgtaccaaatggcaatactaat
gctcctattagtgaaggaataaatggtgttgaagttgaacagagattgaaccaacctgat
gataggcatgttatagacttgactgctcattctatgacaaataatgtggagttgagatct
ggaaccttgcagtcacctgttgcaatttttccaaatgccacaggtcctgcatctgtgaga
ccactcatgccttcgcagaaaccaggtttacttggacctcctgttagacgagatagcttt
tctgatcgtgattatgacatgaagagaggactgcttcctatgaagcatatagacttaagg
aatcaaagtgtaggtgaaccgccacttctatctagattaccaacacaaccttcagcaact
gcagtccaggcacaaggaggctggttggtggaagatgatgtgaataaaggacatctaaat
aaccgatcttcagggcttattaaagaatctgatgcattaagatctgacaggcagagagct
catcagaattcttcttcttatacaaccccagtccctgctgctcctagtttattctcacaa
acctcggaagtgaagagtgaggaggtatacagtggacatgatttacagaaacaaaatctt
cctcaagccagtccgccgttggatgctggagtctccaaggaccaagcaccatcttacagt
agagaatctcaacctgaagctggaaaagcaaacccgctaccatcccctttatctattgga
gtactgcaggaaattgcacgaagatgctgctcaaaggttgagttcaggtctgttttaagc
accagcaaggatttgcagttttctgttgaggttctgttcactggcgagaagataggtgtt
ggaatgggtaagactaggaaggatgctcaacaacaagctgctgagaatgcccttcacagc
ttggctgaaaaatatgtagcgtatgttgcacctcgttcagcagctgtggacaaagatttt
gataaactttctcttgaaaatgacaatggatttctgttcgacattatcgatcctggatcg
actgaactacttaaagaagatgagttgcccaaggaaagtgctcctgaggctgcagaggtt
gaacatcagagagcatcctcccctgcagtagtaaatcaccaagtacaaaagcgtgccaat
tcccctagattaccacaatctgtttccaataaacgatcaaaggaagaattacaccgaatt
tcgcagaatttatcgtcctag

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