Ziziphus jujuba (Chinese jujube): 107431005
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Entry
107431005 CDS
T04794
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A isoform X1
KO
K07466
replication factor A1
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03030
DNA replication
zju03420
Nucleotide excision repair
zju03430
Mismatch repair
zju03440
Homologous recombination
zju03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107431005
03420 Nucleotide excision repair
107431005
03430 Mismatch repair
107431005
03440 Homologous recombination
107431005
03460 Fanconi anemia pathway
107431005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zju03000
]
107431005
03032 DNA replication proteins [BR:
zju03032
]
107431005
03400 DNA repair and recombination proteins [BR:
zju03400
]
107431005
Transcription factors [BR:
zju03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107431005
DNA replication proteins [BR:
zju03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
107431005
DNA repair and recombination proteins [BR:
zju03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
107431005
MMR (mismatch excision repair)
107431005
DSBR (double strand breaks repair)
HR (homologous recombination)
107431005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
zf-CCHC
RADX
zf-CCHC_3
CDC24_OB3
DUF223
BRCA-2_OB1
DUF936
Motif
Other DBs
NCBI-GeneID:
107431005
NCBI-ProteinID:
XP_015897369
UniProt:
A0A6P4BEB7
LinkDB
All DBs
Position
6:join(9219482..9219780,9220831..9223156)
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AA seq
874 aa
AA seq
DB search
METTTLTEGAIMKICRDEYPKGENWKPVLQILDVRMVNTQGGQPVAPEKERYRVVISDGA
YHQQGMLGTQNNDLVRQGRLQKGSLVRLKEFVCTPVQARLIIIIVDLDLILETCDLIGEP
EPAPKFVNTPPSGAVTGNPQSSVGNKPSGGQVNETVPATSVEQPRMNQSFGSAYSTNPNS
GRYAAPGTPSIYPKIEPGAGFPRPAPVGGSYSNQNMGFNNPRSEVSRPPQNSHVRAPYPS
YQQPPPMYSNRGPIAKNEAPARILPIAALNPYQGRWTIKARVTSKGELRHFNNPRGDGKV
FSFDLLDSEGGEIRVTCFNAVADQFYNQIEVGKIYMISRGSLKPAQKAFNHLHNDHEIFL
ESTSIVQPCYEDDNSIPRQQFHFHPISDVQEMDNNSVVDLIGVVSFINPASSIMRKNGTE
TQKRSLHLKDMSGRSVELTLWGNFCNAEGQRLQNMCDSGVFPVLAVKSGRVNDFNGKAVG
TISSSQLFINPDFPEAHRLKEWFDKEGRNAPSVSISREISTVGRTDMRKTISQIKDEKLG
TSEKPDWITVGATISFIKVDNFCYTACPLMIGDRQCNKKVTNNGDGKWRCDRCDQSIEEC
DYRYILQLQIQDHTGLTWVTAFQEGGEEVMGVSAKSLYYLKHEEQDDEKFAQIVRKVLFN
KFIFKLKIKEETFSDEQRVKSTVVKAERVNFSSESKFLLNLMDKLKAGNSSSSIPKVENI
IPNPGLNTNAPGNFGTRQPTPADFGNSVNAVREFGTPANQVGQYGNRYSSSGCPSIGSSG
MYLSCNSCGGTGHSSMNCPSIANSPGLSSGGGYGNRASSGPSFGNSSDECYKCHQTGHWA
RDCPGSSNIPPSYGSGSVVPGRYGGVPKQQVGGF
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggagacgacgacgctgacggagggagcgataatgaagatatgcagggacgagtatccg
aaaggggagaactggaagccagtgttgcagatacttgatgtgaggatggtgaacacgcag
ggaggacaaccggttgctccagagaaggagaggtacagggtggtgatctccgatggggct
tatcatcagcaaggaatgctggggactcagaacaatgatctggtcaggcaaggaaggttg
cagaagggatcgcttgtccgcttgaaggagtttgtttgcactccagtacaagcccgccta
atcattattatagttgatctagatttgatacttgaaacatgtgatctcattggtgaacct
gagccagcaccgaaatttgtgaatacaccaccatcaggggcagttactggaaatccacaa
tcatctgttgggaataaaccttctggaggtcaggttaatgaaactgtgcctgcaacatct
gtagaacagcctagaatgaatcaatcatttggcagtgcttattctactaatcctaactcg
gggagatatgctgcaccaggtacaccgtccatttaccctaaaatagagcccggtgctggg
tttcctagaccggctccggtaggtgggtcatatagcaatcagaacatgggctttaataac
cctagatctgaggtttcaagaccgcctcaaaattctcatgtccgtgcaccttatccatca
tatcagcagccgcctccaatgtactctaacagaggaccaatagccaaaaatgaagctcct
gctaggattttaccaattgctgctctgaatccctatcagggaaggtggacaatcaaggct
agagtgacatcaaagggagaacttaggcactttaacaatcctcgtggtgatgggaaagta
ttttcttttgatcttcttgattctgagggtggggaaattcgggtgacctgctttaatgct
gtggctgatcaattttacaatcagattgaagttggtaagatttatatgatttcaagagga
agcttaaaaccagctcaaaaggctttcaaccacctccataatgatcatgaaatttttctg
gagagcacatcgatagtacagccatgctatgaggatgacaactctattccacggcagcag
tttcatttccatcctataagtgatgtacaagagatggacaacaatagtgttgtggattta
ataggtgtggtatcatttattaatcccgcttcttcaataatgagaaaaaatggtactgaa
actcaaaagagatcactccatttgaaggatatgtctggcagaagtgttgaattaactctg
tggggaaacttttgcaatgcagaaggacaaagactgcaaaatatgtgtgattctggggta
tttccagttctggctgtgaaatccggcagagtcaatgatttcaatgggaaggcagtggga
actatttcttcaagtcagctctttataaacccagattttccagaggctcacaggctgaag
gaatggtttgacaaggaaggtagaaatgccccatcagtatctatttccagggaaatatct
actgtgggtagaacagatatgcgaaagaccatatcccaaattaaagatgagaagttaggg
acttctgagaagccagattggataacagtaggtgcaaccatttcattcattaaggttgat
aatttctgctacacagcatgccctctcatgattggcgatcgacaatgtaacaaaaaggtt
acaaataatggagatggaaaatggcggtgtgatagatgtgatcaatccattgaagaatgt
gactacaggtatatactccaattacagatacaagaccacactggcttaacttgggtaact
gcatttcaggagggtggtgaggaagtaatgggtgtatctgcaaaaagtttgtattatttg
aaacatgaggagcaagatgatgagaaatttgcacaaattgttcgcaaggttctttttaac
aaattcatattcaagttgaaaattaaggaggaaacttttagtgatgaacaacgtgtgaag
tcaactgttgtcaaagcagaaagggtgaacttttcatcggagtctaaattccttttgaat
ttgatggacaagttgaaagcaggaaattcgagttcttctatcccaaaggttgaaaatatc
attccaaaccctggtttgaataccaatgctcctggaaattttggaactagacagccaaca
cctgctgactttggtaacagtgtcaatgcagttagagaatttggaacaccagcaaatcaa
gtgggtcagtatggaaaccgatattctagttcagggtgtccgtcaattggctcttctggt
atgtatctgagctgtaatagctgtgggggtactggtcatagctcgatgaactgcccaagt
atagcaaatagtccaggactatcatcgggagggggctatggaaatagagcatcatctggc
ccaagctttggtaattcttctgatgaatgctataaatgccatcaaacagggcattgggca
agagactgtccagggtcatctaatattcctccatcttatggaagcggcagtgttgttcct
ggaagatatggaggtgttccaaaacagcaagtcggtggcttttga
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