KEGG   Ziziphus jujuba (Chinese jujube): 107431037
Entry
107431037         CDS       T04794                                 
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
  KO
K08775  breast cancer 2 susceptibility protein
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03440  Homologous recombination
zju03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    107431037
   03460 Fanconi anemia pathway
    107431037
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zju04121]
    107431037
   03036 Chromosome and associated proteins [BR:zju03036]
    107431037
   03400 DNA repair and recombination proteins [BR:zju03400]
    107431037
Ubiquitin system [BR:zju04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    107431037
Chromosome and associated proteins [BR:zju03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     107431037
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     107431037
   FA (Fanconi anemia) pathway
    Downstream FA components
     107431037
SSDB
Motif
Pfam: BRCA-2_OB1 BRCA2 BRCA-2_helical Tower
Other DBs
NCBI-GeneID: 107431037
NCBI-ProteinID: XP_024934763
UniProt: A0A6P6GL00
LinkDB
Position
6:join(10306233..10306404,10306484..10306630,10307053..10308105,10308193..10308317,10308407..10308561,10308878..10309000,10309082..10309279,10309362..10309443,10309542..10309592,10309692..10309767,10309879..10309990,10310115..10310186,10310575..10310773,10310852..10311034,10311258..10311397,10311466..10311528,10311656..10311869,10312412..10312579,10312663..10312719)
AA seq 1129 aa
MSTWQILSGDGKSFRWEISDQNVETQHQDEPGNGNSSLIQGHDSSSSLPSMADLLLQGCS
KLLENRDEGVAKFPMFKTGLGRSVEVKQSSIAKALSVLGNDADMEGGEIQAKDNENGFSN
SFFQTGHVQAGDDEFGFSSSIFQTGHVEARADECGFSNSLFQTGSGKLVNISSDGLARAK
TLLGLEADNGPPNVDVSVSRSSLIHKTDFGQSRFKNGAKPHFMQSTMQNSAPKPPPIKFH
TAGGRSLSVSSDALQRARSLLGDPELGTFLSEGDTNDSVFAFPNGRSFNGSLLNGENDSC
SSLSNQEMAKSKHASKSFVSPFRSTSNQLQLALNSGTKNLGANLINQFDAVSDDNICWPN
SNTTCLQKPLSNGSSVSNTVVDISLANDIALRKNPVGMSRGGHLVDISNTIGTKSMGIKQ
PTNEKKRIGRTSVSPFKRPRSSKFTTPVNKNIPFVPKGLSTLSSKHSCCKGRVSIRYPFQ
VKRKYIKEYFGVPPSENNMLACFSDQVRWIRSDNAEKYTFPDSSGVSCIGAEAFFHMLGQ
AGASSQFASKEWVMNHYKWIIWKLACYERCYPTKCAGKFLTISNVLEELKYRYEREVNHG
HRSAIKRILEGDASPSTMLVLCISAVCSNCEPQIEDSTTDLDQAETNGATKVELTDGWYS
VNAVLDALLSKQLASGKMFVGQKLRIWGAGLFGWVGPVSPLEVPRTVNLLLHINGTYRAH
WADRLGFCKGVGAPLAFKSIKGNGGPVPRTLVGITRIYPVLYKERLSNGRSIVRSERMET
KAVQSYSQRRSIIIEGIVSEFQRGIKHPNTHNDSDSEEGAKILKILETASEPEVLMAEMS
PEQLSSFASYQAKIEAIKQSDIEKSVEKALTDAGLGKREVNSFMRVRVVGLTSKLYQGKD
IPKEGLITIWNPTEKQQTELAEGKAYDISGLLPINTEGDTIYLQTRGSTVWHPLSPQAIE
HFKPFFRPRKSVQLSNLGEVSLSSEFDIAAFVVFVGEVYRAAHVKKQWVFVTDGSISELK
SEEFSNSLLAICFCSPYTDDDDLFSPINCNLAGSTAGFCNIVKRAKDQMNNLWVAEASEN
SSYFLSFNTPHCSHLKDAAASAERWAKISTLTTDKLRQKVLFIIGDCKG
NT seq 3390 nt   +upstreamnt  +downstreamnt
atgtctacgtggcagatattatccggggacggaaaaagtttccggtgggaaatctccgat
caaaacgtcgagactcaacaccaagacgaaccaggaaatggcaactcgtctcttattcaa
gggcacgactcaagctctagtttaccttccatggccgatctcttgcttcaaggatgttcg
aagcttcttgagaatcgcgatgaaggcgttgctaagttcccgatgttcaaaactggacta
gggaggtcagttgaggtgaaacagtcttccatagccaaagcattatcggttcttggaaat
gatgctgatatggaaggaggtgaaatacaagctaaagacaatgaaaatggtttctctaat
tcatttttccagacaggccatgtgcaagctggagatgatgaatttggtttctctagttca
attttccagacgggccatgtggaagctagagctgatgaatgtggtttctctaattcgctt
ttccagacgggctcagggaaattagtcaatatatcttcagatggtcttgccagagcaaag
accttgttgggtttggaggcagataatggtcctcctaatgttgatgtatcagtttcaaga
tcttcactgattcataagactgattttgggcaaagtagatttaaaaatggggcaaaacct
cattttatgcaatccacaatgcagaattcggctcccaaaccgccaccaatcaagttccat
accgcaggtggaagatcattatctgtctccagcgatgcactgcaacgtgcaaggagtctt
cttggtgacccagagttgggaactttcttgagtgaaggggatacaaatgattcagttttt
gcatttccaaatgggagaagttttaatgggagtttgttgaatggggaaaatgattcttgc
tctagcttatctaatcaggaaatggctaagagcaagcatgcatctaaaagctttgtatct
ccttttcgctcaacttctaatcaattacagctggcactcaattcaggaactaaaaattta
ggggccaacttgataaaccaatttgatgctgttagtgatgataatatttgctggccaaac
agcaacacaacttgtttgcagaagcccctaagtaatggatcctcggtgtccaatacagta
gtagatatctctttggcaaatgatattgctttaaggaagaatccagttggaatgtcacga
ggagggcatttggttgatatatcaaatacaattggcacaaagagtatgggcattaaacaa
ccaactaatgaaaagaagagaatcggaagaacttctgtctctccattcaagaggcctcgt
agctctaaattcaccactcctgtcaataagaatatcccttttgttcctaagggtctttct
actttgtcctctaaacattcctgttgcaaaggaagggtttccattcgatatcctttccag
gttaaaagaaagtacatcaaggaatattttggagtgcctccatcagaaaataacatgttg
gcatgtttctcagatcaggtcagatggatcagatcagataatgcagaaaagtatacattt
cctgattcctctggcgtaagttgcataggagcagaagcatttttccacatgctcggtcaa
gctggagcttcctcacaatttgcttccaaagagtgggtaatgaatcactacaagtggatc
atctggaaactggcatgttatgagagatgctatccaactaaatgcgctggaaaatttttg
acaatttccaatgtgcttgaggaattgaagtatagatatgaaagagaagtgaaccatggt
caccgttcggcaattaaaagaattcttgaaggggatgcttcaccttccacaatgttggtc
ctatgcatttctgcagtttgttcaaattgtgaaccacagattgaggatagcactacagat
ctagatcaggctgaaactaatggtgctacaaaagttgaactaacggatgggtggtattca
gtaaatgctgttttggatgcactgctgtcaaagcagcttgcttctggaaaaatgtttgtt
ggacagaaacttcggatttggggagcaggattgtttggctgggttgggcccgtttcacca
cttgaggttccaagaacagttaatttactgctgcacataaatggaacatacagagctcat
tgggctgatcgactgggattttgtaagggtgttggtgctcctttagcatttaaaagcata
aagggcaatgggggaccagttcctcggacattagttggaatcacacgaatataccccgtt
ctctacaaggaaaggttaagtaatggaagatcaattgtgagatcagagagaatggaaact
aaggcggtgcaatcatacagccaaagacgctctattattatagagggcattgtttctgag
tttcaaagagggataaaacatccaaatacccataatgatagtgacagtgaagaaggggca
aaaattttgaagatactagagacagcctctgaacctgaagttttaatggcagagatgagc
ccagagcaattgagttcttttgcatcgtatcaagcgaaaatagaggcaataaagcagtct
gacatagagaaatcagttgagaaagcattaacagatgctggcttaggtaagagagaagtc
aactcatttatgagggtaagagtggttggactaacgagtaaactctatcaaggaaaggac
atacctaaagaaggcttgataacaatctggaaccccacagagaagcagcaaactgagctg
gctgagggtaaggcatatgatatttcgggacttctaccaataaatactgaaggtgatacc
atttacctgcaaacaagaggatccacagtctggcatcctttatctccacaagcaatagaa
catttcaaaccatttttcagacctcgtaagtcagtgcaactgtcaaatttgggtgaagtc
tctctttccagtgagtttgatatagctgcatttgttgtctttgtgggggaggtctacaga
gctgctcatgtaaagaaacagtgggtgtttgtgacagatggctccatatctgaattaaaa
tcggaagaattttctaattctttgcttgccatctgcttctgctcaccttatactgatgat
gatgatttgttttcaccaatcaactgtaatcttgctggatcaacggctggtttttgtaat
atcgtaaaaagagcaaaagaccaaatgaataatctctgggtagctgaagcttcagaaaat
tcttcctattttttgagttttaacactccacattgctctcacctcaaagatgcagctgcc
tctgctgaaagatgggcaaagatctctaccttgactactgataaacttaggcagaaggtt
ttatttattattggtgactgtaaaggctaa

DBGET integrated database retrieval system