Ziziphus jujuba (Chinese jujube): 107431316
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Entry
107431316 CDS
T04794
Name
(RefSeq) cell division control protein 48 homolog C isoform X3
KO
K14571
ribosome biogenesis ATPase
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107431316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zju03009
]
107431316
Ribosome biogenesis [BR:
zju03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
107431316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
RuvB_N
AAA_5
AAA_lid_3
TIP49
AAA_14
AAA_16
AAA_22
AAA_2
RNA_helicase
AAA_28
nSTAND3
AAA_17
AAA_33
IstB_IS21
AAA_18
Rad17
NPHP3_N
Bac_DnaA
Parvo_NS1
Mg_chelatase
AAA_3
Viral_helicase1
ATPase_2
ABC_tran
AAA_25
TsaE
NB-ARC
NACHT
Cytidylate_kin2
AAA_19
Nucleolin_bd
AAA_11
Sigma54_activ_2
AAA_7
ExoD
Motif
Other DBs
NCBI-GeneID:
107431316
NCBI-ProteinID:
XP_024934847
UniProt:
A0A6P6GL65
LinkDB
All DBs
Position
6:join(5490446..5491403,5491750..5492366,5492871..5493023,5493438..5493554,5493683..5493787,5493948..5494013,5494093..5494113)
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AA seq
678 aa
AA seq
DB search
MGKRSGSSNLIKLRRRLEHFKHRESSTVDEIVHHLRDNYPDYHRTKLNDLNRLVQQTLDS
FPSRRINLLAAKRAKTPPPPPPFIFDADDDEEVGDGGRSGSRKKPKRIHRIHQDRPSSSP
SDSSSSSEESSDDGDGAVSTSEDAVYGEKVEPEFDLTKSMLRARYTESNSVTTHRAASEV
KEEKNVELELPGRDKIDMVNGELDGGPSSRLPNESSKREAKGGSVVSKSEAVSVVKGNEG
PKFKDLGGIDKVLEELKMEVLVPLCHPQLPRSLGVKPMAGILLHGPPGCGKTKLAHAIAN
ETGLPFYKISATEVVSGVSGASEENIRELFQKAYRTAPSVVFIDEIDAIASKRENLQREM
ERRIVTQLMTCMDESQRLVQPTTATSDSESSDYTPGYVLVIGATNRPDAVDPALRRPGRF
DREIGLGVPDENARAEILVLLTSNLRLEGSFDLSKIARSTAGFVGADLAAVANKAGNLAM
KRIIDERKSLLSGDSIDEEPSEEWWRRPWLPEEVEKLSITMADFEQAVKMVQPSSRREGF
STIPNVKWEDVGGLDILRKEFDRYIVRRVKYPELHEEFGLDMETGFLLYGPPGCGKTLIA
KAIANEAGVNFIHIKGPELLNKYVGESEQAVRTLFSRARTCSPCILFFDEVDALTTQRGK
EGGWVVERLLNQNTEPIA
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaggtcagggagttcaaacctgatcaaattacgccgtcgtttagagcacttc
aagcatcgcgaatcctccaccgtcgatgaaattgtccaccatcttcgcgataattaccca
gactaccatcgcaccaagctcaacgatctcaacaggttagtccagcaaaccctagactcc
tttccctctcgccgaatcaacctcctcgccgccaagcgagcgaaaacgccgccgccgccg
ccgccgtttatattcgacgccgatgatgatgaagaagtcggagatggtggccggagtgga
tccaggaagaaacctaagagaatacaccgcatccatcaggaccgtccatcatcatcaccg
tctgattcatcttcatcatcggaggaatccagtgatgatggagatggtgcggtatccacg
tcggaggacgcagtgtacggcgagaaagtggagccggagttcgacctcacgaaatcgatg
cttcgagcaaggtatacagaatccaacagcgttaccacgcacagagctgcttccgaggtg
aaggaggagaagaatgtagaactggagcttccaggtcgtgataagattgacatggtgaat
ggagagttagatggagggccaagtagcagattgccgaatgagtcgtcgaagagggaagca
aaaggtggttctgtggtttcgaaaagtgaggctgtttctgtggtgaaagggaatgagggg
ccgaagttcaaggatttgggtgggatagataaggttctggaggagctgaaaatggaggtt
cttgtgccactttgccatccgcagttgccgcggtcgctgggagtgaaacccatggcgggg
attttgttacatggtcctcctggctgtggcaagaccaaattggctcatgccattgccaat
gagactggactacctttttataagatttctgctactgaggttgtctctggtgtatcaggc
gcatctgaagaaaatataagggagcttttccaaaaagcatataggactgctccctctgta
gtatttattgatgagattgatgcaattgcttcaaaaagagaaaatttacaacgagaaatg
gagcggagaattgtgacacaattgatgacttgcatggacgaatcgcagagacttgtacaa
ccaaccactgcaacttcagactcagaaagttctgattatacacctggttatgtacttgtg
attggagccaccaataggcctgatgctgttgaccctgcattgaggaggcctgggcgattt
gatagggagattggattaggtgtgccagacgaaaatgcaagggctgagattcttgttctg
cttactagcaacctaagacttgaaggttcattcgacctttcaaaaatagccaggtcaaca
gcaggctttgttggagctgatttggctgccgtggctaacaaggctggtaatcttgccatg
aagaggatcattgatgagagaaagtctcttttatctggtgattctatagatgaggagcct
agcgaagagtggtggaggagaccatggttgcctgaagaagtagaaaagctttccattact
atggctgattttgagcaagctgtaaaaatggttcaaccctcatctagaagagaaggattc
tctaccatccctaatgtaaagtgggaagatgttggcggtttagatattttgaggaaagaa
tttgatcgttatatagttaggcgtgttaaatatccagagctgcatgaggaatttggtcta
gatatggagacgggatttttgctctatgggcctccaggatgcggaaagacattgatagcc
aaggcaattgctaatgaagcaggagttaattttattcacataaagggtcctgaactacta
aataaatacgttggagaaagcgagcaggctgttcgaacactatttagtcgtgcaagaaca
tgttcaccatgtatactttttttcgacgaggtggatgccttgacaacacaaagggggaaa
gaaggaggatgggttgttgagagattattgaatcagaatactgaacccattgcataa
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