KEGG   Ziziphus jujuba (Chinese jujube): 107431534
Entry
107431534         CDS       T04794                                 
Name
(RefSeq) transcription elongation factor SPT6 homolog
  KO
K11292  transcription elongation factor SPT6
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zju03021]
    107431534
   03036 Chromosome and associated proteins [BR:zju03036]
    107431534
Transcription machinery [BR:zju03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     107431534
Chromosome and associated proteins [BR:zju03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     107431534
SSDB
Motif
Pfam: SH2_2 HHH_7 YqgF SPT6_acidic Spt6_S1 HHH_9 Tex_central_region HTH_44 SH2 HHH_3
Other DBs
NCBI-GeneID: 107431534
NCBI-ProteinID: XP_015897964
UniProt: A0A6P4AR97
LinkDB
Position
11:join(4814179..4814209,4814329..4814430,4815429..4815558,4815902..4815971,4816310..4816460,4816542..4816674,4816803..4817049,4817145..4817351,4817476..4817598,4818106..4818492,4818568..4818678,4818795..4819574,4820310..4820451,4820528..4821693,4822244..4822453,4822867..4823362,4823740..4824203)
AA seq 1649 aa
MGKAVVSDEEDEVGFEDEEREPVDGDPVDDREVEDEDEDEDEEDDDGQDEYEKDGFIVDD
IDEEEPDEEEERVDSDEERQKKKKRKKKEEYRLDEDDYELLEDNNVITRRKDKKFKRLKK
AQRHPGEEPSGFSDEEEFVGSGKSGRTAEEKLKHSLFGDDEGALLEDIAEEEEQAEEEDD
GEIGEEDEMADFIVDEEIDENGAPVRQRKLKRKKSRQAPGVSSSALQEAHEIFGDVDELL
QLRKQGLDSSEWRERRLEDEFEPIVLSEKYMTEKDDQIRELDVPERMQIAEESTGSPPLD
EISVEDESTWIYNQLACGSIPLFGKRGLGNPKEGQDLLVNRDDIIRFLDLHHVQKLDIPF
IAMYRKEECLSLLKDPEKYEVDGNQDKPETTPTLKWHKVLWAIQDLDRKWLLLQKRKIAL
QSYYNKRFEEESRRIYDETRLTLNQQLFESIIKSLKAAESEREVDDVDSKFNLHFPPGEA
GVDEGQYKRPKRKSLYSICSKAGLWEVASKFGYSSEQFGLQLSLEKMRMDELEDAKETPE
EMASNFTCAMFETPQAVLKGARHMAAVEISCEPCVRKYVRSNYLDNVVVSTSPTPDGNVA
IDSFHQFAGVKWLREKPLTRFEDAQWLLIQKAEEEKLIQVTIKLPEEKLNKLISDFNEYY
LSDGVSKSAQLWNEQRKLILQDALFGFLLPSMEKEARSFLTSRAKNWLLMEYGKVLWNKV
SVGPYQRKENDINSDEEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQN
VTDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLACTRLKEDIYEIIFKMVEENPRDVGHD
MDGLSIVYGDESLPRLYENSRISADQLPGQSGIVKRAVAVGRYLQNPLAMVATLCGPGRE
ILSWKLDPLENFLTPDEKYGMVEQVLVDVTNQVGLDINLAISHEWLFAPLQFISGLGPRK
AASLQRSLVRAGAIFTRKEFVTAHDLGKKVFFNSVGFLRVRRSGLAASSSQFIDLLDDTR
IHPESYGLAQELAKDVYDEDAANDDEDALEMAIEHVRDRPSVLKTLAVDEYAKSKNRENK
METFYDIKRELMQGFQDWRRQYEEPSQDEEFYMISGETEDTLAEGKIVQATVRRVQAQKA
ICVLDSGLTGMLMKEDYSDDWRDISELADRVNEGDILTCKIKSIQKNRYQVFLVCRESEM
RNNRYQNFRNLDPYYQEDRSSVQSEQEKSRKEKELAKKHFKPRMIVHPRFQNITADEAME
FLSDKDPGESIIRPSSRGPSFLTLTLKVYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKI
GEDTFEDLDEVMDRYVDPLVGHLKAMLSYRKFRKGTKAEVDEVLRIEKAEFPMRIVYSFG
ISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSA
PSIRSVAAMVPMRSPAAGGSSGASGGSGWGGSTNEGGWRGQSLDRDRSGTPGSRAGRNDY
RNSGSRGGRASGLPRPYGGHGRGRGSYNSSKVSSTGNERQDSGFDAPRWDSVSKDGNEGW
SNFPGAKVQNSPGREAFPGGWGGSGSGSGGNSWGGGGTTDSNGWGNASGSGSGSGSGGNV
GGWGGGAGVGNADPKRSSTGNGWSGSRGW
NT seq 4950 nt   +upstreamnt  +downstreamnt
atgggcaaagctgtggtctcggacgaagaagatgaggttggattcgaagatgaggagagg
gaacctgtcgatggcgacccagtcgatgaccgcgaagtcgaggacgaggacgaggacgag
gacgaggaagatgatgatggtcaggatgagtatgagaaggatggttttattgtagatgat
attgatgaagaggaaccagacgaagaggaagagagggttgacagtgatgaggagagacag
aagaagaagaaaaggaagaaaaaagaggaatatcgacttgatgaagatgactatgaactt
ttggaggacaacaatgttataacccgcaggaaggacaaaaagttcaaaaggctcaagaaa
gctcagcggcatccaggtgaggagccctctggtttttctgatgaggaggagtttgttgga
agtggtaaaagtggacgaactgcggaggagaagcttaaacacagcttattcggtgatgat
gaaggagctttgcttgaggatattgctgaagaggaggagcaggcagaagaggaagacgat
ggagaaattggtgaagaggatgaaatggcagattttatagtggatgaagaaattgatgaa
aatggagctcctgttagacagaggaagttgaagagaaagaaatctaggcaggcaccagga
gtttcgtcatctgcattgcaggaagctcatgagatatttggtgatgttgatgaattgtta
cagctcagaaaacaaggattggattctagtgaatggagggaaagaagacttgaagatgaa
tttgaaccaattgttctttcagagaagtatatgacagagaaagatgaccagattcgagag
ctagatgtcccagaaagaatgcagatagcagaggaaagtactggttctcctccactggat
gaaattagtgtagaagatgagagcacctggatctataatcagcttgcatgtggttcgata
cctttgtttggcaagagaggtttggggaatcctaaagaagggcaggatttgttggtaaac
agggatgacatcatcagattcttggaccttcatcatgtgcagaagttagatattccattt
attgccatgtatcggaaagaggagtgcctaagcttgttgaaggatccagaaaaatatgaa
gtggatggcaatcaggataagcctgagacaacacctactttaaagtggcacaaggtgctg
tgggcaatccaagacttggacagaaaatggctgctccttcagaaacgaaaaattgctcta
caatcgtactacaataagcgatttgaggaggaatctcgacgtatttatgatgagacaaga
cttactttaaaccaacaactttttgaatcaattataaaatcactcaaggctgcagaatca
gagagagaagttgatgatgttgactccaaatttaacttgcattttccgcctggtgaagct
ggtgtagatgaaggacaatataagaggcccaagagaaaatcactttatagcatctgtagt
aaggctggcctgtgggaagttgcaagcaaatttgggtacagctctgagcaatttggtttg
cagttatcgttagaaaaaatgagaatggatgagctagaagatgctaaggaaacgccagag
gagatggcttcaaactttacatgtgctatgtttgagacacctcaagctgtgctcaaggga
gccagacacatggcagcagttgagataagctgtgaaccatgtgtcaggaaatatgtgaga
agcaactatttggataatgttgttgtatcaacgagcccaacacctgatgggaatgttgca
attgattcttttcatcagtttgcaggggtaaagtggttgcgtgaaaagccattgactaga
tttgaggatgcacagtggcttcttatccagaaagctgaagaggagaagcttattcaagtt
actattaagctgccagaagaaaaactaaataagttaataagtgacttcaatgagtactat
cttagtgatggtgtcagtaagtctgctcaactgtggaatgagcagcggaagttaatattg
caggatgcgctctttggttttcttctgccttcaatggagaaagaagcaagatcctttttg
actagtagagcaaaaaactggttactgatggaatatgggaaagttttgtggaataaagtt
tctgtgggaccatatcagaggaaggagaatgatattaactctgatgaggaagctgcacct
agggttatggcttgttgttggggtccaggaaagccagcaactacttttgtgatgctggat
tcatctggtgaggtgctagatgtgctgtacactgggtctcttactttaagatcacaaaat
gttactgatcagcagcgtaagaaaaatgatcaagagcgggtcttgaaatttatgactgac
catcaaccgcatgttgttgtcttaggagctgttaatttggcctgtacccgtttaaaagag
gatatctatgagataatttttaagatggtggaggagaatcctagagatgttggtcatgat
atggatggccttagcattgtatatggggatgaatctttgcctcgtctttatgaaaattct
cggatttctgctgatcagctgcctggccagtcaggcattgttaagcgagctgtagctgtt
gggcgctatcttcaaaatcctttggcaatggttgctacactttgtggaccaggaagagag
atcttatcttggaaactcgatcctttagagaactttctgaccccagatgaaaaatatggg
atggttgaacaggtcttggtagatgttacaaaccaggttggccttgacataaatctggct
atcagtcatgaatggttatttgctcctttgcaatttatttctgggcttggacccaggaag
gcagcatccctgcagaggtctttggtaagagctggagcaatatttacgagaaaggaattt
gttactgcacatgatcttggtaaaaaggtgtttttcaattcagttggttttttgcgtgtt
cgacggagtgggttggctgctagcagcagccagtttattgatttgttggatgatacaaga
atacatccagaatcgtatggtcttgcacaggagctggctaaagatgtttatgacgaagat
gctgccaatgatgatgaggatgcactggagatggctatagagcatgttagagatcggcct
agtgttttgaaaactcttgctgttgacgaatatgctaaaagcaagaatcgtgaaaataag
atggaaacattttatgatataaagagggaattaatgcagggctttcaggattggcgtaga
caatatgaagaacctagtcaggatgaagaattctatatgatttcaggtgaaactgaagat
acccttgctgaagggaaaattgtgcaagccacagtccgcagagttcaggctcagaaggca
atctgtgttctggattctggattgacagggatgcttatgaaagaagactattcagatgat
tggagggatatttctgagttagctgacagggtgaatgagggtgacattctcacctgcaag
attaaatctattcaaaagaacaggtatcaggtgtttctagtttgtagggagagtgaaatg
agaaacaatcgataccagaattttcgaaatcttgatccgtactaccaggaagaccggagt
agtgtacaaagtgagcaggaaaaatctcgcaaagaaaaggaactggcaaagaagcatttc
aagccaaggatgattgttcatccccgcttccagaatataactgcagatgaagcaatggag
ttcttgtccgataaggatcctggcgaaagtatcatacgtccaagttctcgtgggccttca
tttttgactttaactctcaaggtttatgatggggtttatgctcataaagacattgttgaa
ggtggaaaggaacacaaggacattacaagcttacttcgaattggaaagacattgaaaatt
ggtgaggacacttttgaagatttggatgaggtgatggatcgatatgttgatcccctggtg
ggtcacttaaaagcgatgctaagttatcgcaagttcaggaagggtacaaaagcagaagtc
gatgaagtcttaagaattgagaaagcagagtttcctatgaggatagtttactcttttggc
atttctcatgaacatcctggaactttcattctgacttacatacgcagtacaaacccgcat
catgagtatattggtctttatccaaaagggttcaagtttaggaaaaggatgtttgaggac
attgatcggcttgtggcatattttcagcggcatattgatgatccccaacatgattcagcg
ccgtccatcagatcagttgctgctatggttccaatgcgaagccctgcagctgggggctct
tcaggggcatcaggaggcagtggctggggtggttcaacaaatgagggtggttggagaggt
cagtctttggatcgagatcgctcaggtacaccaggttcaagagcaggtcgaaatgattat
agaaacagtggcagtcgaggtggacgtgccagtgggctgcctagaccatatggtggacat
ggccgtggaagaggctcatataatagcagtaaagttagtagcactggtaatgagaggcag
gattctggttttgatgcccccagatgggattcagtcagcaaggatggaaatgagggttgg
agcaatttcccaggtgccaaggtccaaaattctcctgggagggaggcttttcctggtggt
tggggtggaagtggaagtggcagtggtggcaacagttggggcggcggtggtactaccgac
agtaatggctggggtaatgctagtggtagtggtagtggtagtggtagtggtggtaacgtt
ggaggttggggtgggggtgctggtgttggtaatgctgaccccaaaagaagttctaccggg
aatggttggtcagggagtcgtggttggtga

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