Ziziphus jujuba (Chinese jujube): 107431711
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Entry
107431711 CDS
T04794
Name
(RefSeq) uncharacterized protein LOC107431711
KO
K12586
exosome complex component RRP43
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107431711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zju03019
]
107431711
Messenger RNA biogenesis [BR:
zju03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107431711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
ARMET_C
Motif
Other DBs
NCBI-GeneID:
107431711
NCBI-ProteinID:
XP_015898175
UniProt:
A0A6P4AK76
LinkDB
All DBs
Position
11:join(6226604..6226763,6226877..6226926,6227035..6227104,6227207..6227312,6227574..6227640,6227891..6227966,6228045..6228334,6228557..6228640)
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AA seq
300 aa
AA seq
DB search
MGLPNVSGDLSAEMDVDAFRRLFPLRFYERHLVESIRPDARPLGRARDTTLALGAVASAD
GSALAKIGLTTMLAAIKMEVMTPSTETPDEGSIAIDFHMPPICSPLVRPGRPAEAEPVVS
KQLSDTILSSGMINLKELSLINGKAAWMVYLDIYCLDADGALFDAALLSAVAAFSHLQIP
VVSLNDHGKVVLMSEENEGGKDPVNKEKRKLTLSSIPFSLTCILHKNYILADPTAEEESI
METLVTVVLDSSGQLVSLYKPGGPVLAYTSAIQDCVALTRQRVKELRKILDEALSGMEVY
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgggattgccaaatgtttcaggggatttgtcagcagaaatggacgtggatgctttcaga
cgacttttccctctgcgcttctatgagcgccatcttgttgaatctatacgccctgatgcc
aggccacttggaagagccagagatacaacgttagccttaggggcagttgcatctgctgat
ggatcagcactagcaaagattggattgactaccatgctggctgctataaaaatggaagtc
atgacaccttcaactgagacgccagatgagggatccatagctattgatttccacatgcct
ccaatttgttctccgcttgttaggcctggtaggcctgctgaggcagaaccggttgtgtcg
aagcagttatctgatactattctaagttctggcatgattaatttgaaggagttatccttg
atcaatggaaaagctgcttggatggtctacctggacatatactgtttggatgctgatggt
gccctctttgatgctgctttgctctcagcagttgccgccttttctcacttgcagattcct
gtagtttcattaaatgatcatgggaaagtagttcttatgtctgaggagaacgagggagga
aaagatccagtaaataaagagaaaaggaagctcacattgagcagcataccattttcatta
acatgcatacttcacaagaattacatattggctgaccctactgcagaggaagaatcaatc
atggaaactcttgtaactgtggttttggattcatctggtcaacttgtctctctttacaag
ccaggtggacctgtacttgcctatacttcagctattcaggattgtgttgcgctgactagg
caaagagtgaaggaacttcggaagattttagatgaagccctttccggtatggaggtttac
tag
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