Ziziphus jujuba (Chinese jujube): 107432010
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Entry
107432010 CDS
T04794
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
107432010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zju03400
]
107432010
DNA repair and recombination proteins [BR:
zju03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
107432010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
107432010
NCBI-ProteinID:
XP_048321308
UniProt:
A0ABM3I607
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All DBs
Position
11:8019091..8021040
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AA seq
649 aa
AA seq
DB search
MEEGGGKVRALIEKATNSTQPEVDPRLLKAIKSVVRYSDSELRLAVHALMEFMKRDHSQV
RYLTLLIIDQLFMRSKLFRTLLVENLDQLLTLSVGFRRNQPLPAPPSVATLLRNKAIEFL
EKWNSSFGIQYRQLRLGFDYLKNTLRFQFPNLQANAARIQQERRERERRSKEILLNKFET
LKENFSSIKEEIQSTIDEIGECLDIVRNTGEESMLLARLDDDDDDDDIEEFRSSELQQIR
RETLEEGEKVHENSENKVVFDALRELYKLLVTKHLVSVQEWISVLVRVEVTDNRFRDSSL
KDFIDIRNLLQSVKKKCEESGCSLPKATTNEEEEDFWEEGKIELNKSGTVSACNRENGDL
AIVSEPSDSKITVRHGKKKLESEGVGTESSSPRSKLLAEAPMVNWGPYLDNWGSKRDVLA
NQRGLELESHWGRVDYDAVIPAEKIAELNVHATVYKEEQLEIQQCRAPLRKGGLCQRRDL
RVCPFHGPITPRDDEGKPLDQNLSKDEIASDSGTDLVEAEQLARQAVKNVRARDKDVARK
REIDRQSMKHAKRAKLAKIREHNEAVLRDAALASTSRSATAGEDMMASDSGNASDRSKKQ
ALASMLRKKVTPKDRLAQRLLNTKARDATIRQLTSAEDANYKEAFPSQW
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggaagagggaggggggaaggtgagggctcttatagagaaggctacaaactcgacacaa
ccagaggtggatccacgactccttaaagccattaagtctgtcgtacggtactctgattcg
gagctcagacttgctgtccatgccctgatggaattcatgaagcgtgaccactctcaggtt
cggtacttgacacttctaataattgaccaactatttatgcggtccaagcttttcagaact
ctccttgttgagaatttggatcagttgttgactttaagtgttggatttcgaagaaatcag
cctcttcctgctccaccgtctgtggcaacccttctgcgtaataaggcaatagaatttttg
gagaagtggaattcttcttttggaattcagtatagacagctcagattagggtttgattac
cttaagaacactctcaggttccagtttcctaatctacaggcaaatgcagctaggattcag
caggagagaagggaaagggagaggaggtcaaaagaaatcttactcaacaagtttgagact
ttgaaggaaaatttttcatccataaaggaagaaatccaatcaacaattgatgagatagga
gagtgtttagatattgtccgcaatactggagaagagagtatgctgttggctcgtttggat
gatgatgatgatgatgatgatattgaagagttccgttcctcagaattgcagcagatacgt
cgtgagacattggaagaaggagaaaaggtccacgaaaacagtgagaataaagtggttttt
gatgcgctgagggagctttacaagcttctagttacaaagcatttggtttcagtccaagaa
tggatctctgttcttgtaagggttgaggtgacagataacagatttagagattctagtttg
aaggatttcattgatatacgaaatcttcttcagtcagtgaagaagaagtgcgaagaatca
ggttgttctcttcctaaggccacaactaatgaagaagaagaagacttttgggaggagggt
aaaattgaattaaataagagtgggacggtaagtgcttgcaatagggaaaatggagatctt
gctattgtatcagaacctagtgactcaaaaataactgtcagacatggcaagaaaaagtta
gaatctgaaggcgttggaactgaatcaagctctccaaggagtaagcttttggctgaagct
cccatggtgaactggggcccttatttggacaactggggttcaaagagggatgtattggct
aatcaaaggggtttggaacttgaaagccactggggtagagtggattatgatgcagttatt
ccagcagagaaaattgcagagttaaatgttcatgctactgtatacaaagaagagcagctt
gaaattcaacagtgtcgtgctcctttgcgtaaaggtggactttgtcaaagaagagatttg
agagtttgtccatttcatggacctatcacacccagggatgatgagggaaagccacttgat
cagaatctgtcaaaagatgaaatagcttctgactcagggactgatttagtagaagcagag
caattagcaagacaagctgttaagaatgttcgagcgagagataaagatgtagcacggaag
agagaaatcgatcgacagtccatgaagcatgcaaagcgtgcgaagcttgcgaaaatccgt
gagcacaatgaggcagttttacgagatgctgcattggcttcaacttcaagatctgcaact
gccggagaagatatgatggcaagtgacagtggaaatgcatcagacagaagcaagaagcaa
gcgctggcatccatgctacggaagaaagtgacaccaaaagataggctagcacagaggctt
ttgaatacaaaggcaagggatgcaacaattagacagcttacatcggctgaggatgcaaat
tacaaagaggcctttcctagtcaatggtaa
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