Ziziphus jujuba (Chinese jujube): 107432208
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Entry
107432208 CDS
T04794
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107432208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zju04131
]
107432208
Membrane trafficking [BR:
zju04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107432208
Hops complex
107432208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
Clathrin
zf-C3H2C3
TPR_Vps41
zf-C3HC4_2
zf_RING_Vps8_fungal
zf-RING_5
zf-RING_6
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
107432208
NCBI-ProteinID:
XP_015898778
UniProt:
A0A6P4AQL0
A0A6P6FKE2
LinkDB
All DBs
Position
4:join(12483667..12483888,12484182..12484355,12484466..12484789,12484923..12486692,12487422..12487811)
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AA seq
959 aa
AA seq
DB search
MYQWRKFEFFEEKLAGKATIPEEVGGRVECCSSGRGKVVIGCDDGTVSLLDRGLHFNYAF
QAHSSSVLFLQQLKQRNFLVTIGEDEQIAPQQSAMCLKVFDLDRMEPEGSSSSSPDCIGI
LRIFTNQFPEAKITSFLVLEEAPPILLMAIGLDNGCIYCIKGDIARERITRFKLQVDGPP
DQSQSSITGLEFRVDGQSLLLFAVTPSSVSLFNLQSQPPKRQTLDQIGCNVNSVAMSDRS
ELIIGRHEAVYFYEVDGRGPCWAFEGEKKFLGWFRGYLLCVIADQRSSKNTFNIYDLKNR
LIAHSLVVKEVSHMLCEWGNIILIMADKSVLCVGEKDMESKLDMLFKKNLYTVAINLVQS
QQADAAATAEVLRKYADHLYSKQDYDEAMAQYIHTIGHLEPSYVIQKFLDAQRIYNLTNY
LENLHEKGLASKDHTTLLLNCYTKLKDVEKLNIFIKSEDGVGEHKFDVETAIRVCRAANY
HEHAMYVAKKAGRHEWYLKILLEDLGRYDEALLYISSLEPSQAGVTVKEYGKILIEHKPV
ETIEILMKLCTEDGESDKRKAFSGSYLSVLPSPVDFLNIFIHYPQSLMDFLEKYTNRVKD
SLAQVEIHNTLLELYLSNDLNFPSFSQATNGVEGNSRIRSGTPVMSKAESNGKVIASKDS
IKEKDRLERHKKGLNLLKSAWPSELEHPLYDVDLAIILCEMNAVKQGLLYLYEKMKLYKE
VIACYMQAHDHEGLIACCKRLGDSGKGGDASLWADLLKYFGELGEDCSKEVKEVLTYIER
DDILPPIIVLQTLSRNPCLTLSVIKDYIARKLEQESKLIEEDRRAIDKYQEDTLAMRKEI
EDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHQRCLGDNEKECPECAPEYRSVLEM
KRNLEQNSKDQDRFFQQVKSSKDGFSVIAEYFGKGVISKTSTAATAASESGTVSSPSGF
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagtggaggaagttcgagttcttcgaggagaaattggcgggaaaggctacgatt
cccgaggaggtcggtggaagagtcgagtgctgctccagcgggagagggaaggtggtgatc
ggatgcgacgacggtaccgtgagccttctcgaccgaggtctccatttcaattacgccttt
caagctcattcttcctccgtcctcttccttcagcagctcaagcaaagaaactttttggta
acaattggagaagatgagcaaattgctccgcagcaatcagctatgtgcctcaaggttttt
gaccttgataggatggagcctgagggctcgagctcaagcagtcctgattgtattggaatc
ttgcgcattttcactaatcagtttcctgaagcaaagattacatcgtttttagtcctagaa
gaagccccaccaatactgcttatggctataggcttagataatggttgcatttactgcatt
aaaggggatattgcacgggagcgaatcacccgcttcaagcttcaggtggatggtccgcct
gaccagagccaatcctcaattacaggtctggagttcagagtggatggtcaatcccttctg
ttatttgctgtaactcctagttcggtgagcttattcaacttgcaaagtcaaccaccaaaa
cggcaaacccttgatcagattggatgcaatgtcaatagtgttgcaatgagtgatcgttcg
gagttgataattggtagacatgaggctgtgtatttttacgaagttgatggtcgtggtcct
tgttgggcttttgaaggagagaaaaaattcctagggtggtttcgtggatatctattgtgt
gtcattgcagatcaaagaagcagcaagaacacattcaacatttatgatctgaagaatcgg
ttgattgcccacagtctagtggttaaagaagtttcccacatgctttgtgaatgggggaac
ataatactaattatggctgacaaatcagttttatgtgttggagagaaggatatggaaagc
aagttagatatgctttttaagaagaatctttatactgtagctatcaacctagtccaaagt
cagcaagctgatgccgctgcaactgctgaggtgctaagaaagtatgcggatcatctctat
agcaaacaagattatgatgaggctatggcccaatacattcatacaattggccacctagag
ccttcttatgtgatacagaaatttttagatgcacaaagaatctacaaccttacaaattac
ttagaaaatttgcatgaaaaggggctggcatctaaggatcataccactcttctgcttaac
tgctacaccaaactgaaagatgttgaaaagctgaacatcttcataaaaagtgaggatggt
gtcggggagcataagtttgatgttgagactgctataagggtctgccgtgctgcgaattat
catgagcatgcaatgtatgttgctaagaaggcagggcggcatgaatggtacttaaaaatc
ttacttgaagaccttggcaggtatgacgaagccttgctatatatttcaagccttgaacca
agtcaagctggggtgacagtaaaagagtatggtaaaattctcatagaacataagccagtt
gagacaattgagatactcatgaaactttgcacggaggatggagaatcagacaagagaaaa
gccttcagtggttcatacttatccgtgctaccatctcctgttgattttcttaacattttc
atccattatccacagtcccttatggattttcttgaaaagtataccaacagggtgaaagat
tcacttgctcaagtagaaattcataacacacttttggagttgtacttgtccaatgactta
aactttccatcgttctcacaagctaccaatggtgtggagggaaattccaggataagatca
ggaacacctgtgatgtcaaaagctgagtccaatgggaaagtaattgctagcaaagattca
atcaaggaaaaggaccgtttggaaagacataagaagggactaaacttgcttaaaagtgca
tggccatccgagctggaacatccactttatgatgttgatcttgcaataattctctgtgaa
atgaatgcagttaaacaaggacttttatatttatatgaaaagatgaagctctacaaagag
gtaattgcttgctacatgcaagcccatgaccatgagggactgattgcatgttgcaaaaga
ttgggggattcagggaagggaggtgatgcatctctttgggcagaccttttgaaatatttc
ggtgaacttggagaagattgctctaaagaagtgaaggaagttttgacctatatagaaagg
gatgacatcttgcctcctattattgttcttcaaacgctttcaagaaatccctgtctgaca
ctttctgtaattaaagattatattgctcgaaaacttgaacaagaatcaaagctgattgag
gaggaccggcgggctattgataagtaccaggaagatacattggccatgaggaaagaaatt
gaggatcttaggactaatgccagaatctttcaacttagcaagtgcactgcatgcactttc
acacttgatctccctgctgtccactttatgtgtatgcactctttccatcagcgctgccta
ggtgataatgaaaaagagtgtcctgaatgtgctcctgagtatagatctgttctagaaatg
aaaaggaacttggagcagaactccaaagatcaggatcgtttcttccagcaagtgaagagt
tcaaaagatggattttccgtgattgctgagtattttgggaagggggttattagcaaaaca
agtactgcagcgacagctgcctctgaatcaggcaccgtatcttctccaagtggcttctaa
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integrated database retrieval system
