| Entry |
|
|---|
| Name |
(RefSeq) DNA polymerase I A, chloroplastic/mitochondrial isoform X2
|
|---|
| KO |
|
|---|
| Organism |
zju Ziziphus jujuba (Chinese jujube)
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:zju00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107432257
03410 Base excision repair
107432257
03420 Nucleotide excision repair
107432257
03440 Homologous recombination
107432257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:zju03032]
107432257
03400 DNA repair and recombination proteins [BR:zju03400]
107432257
Enzymes [BR:zju01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
107432257
DNA replication proteins [BR:zju03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
107432257
DNA repair and recombination proteins [BR:zju03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
107432257
NER (nucleotide excision repair)
GGR (global genome repair) factors
107432257
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
1:complement(join(38145869..38146030,38146206..38146295,38146367..38146579,38146693..38146785,38147297..38147491,38147562..38147654,38148942..38149419,38149959..38150638,38151185..38151376,38151566..38152460,38153816..38154087))
|
|---|
| AA seq |
1120 aa
MFRPTCLRTQINPHQNPPYLQLCHITTPSLAPPCLSNCGSKLGRVTELIMAMGVSSSSSF
QTTIPSWPRSSILVASSSCSFFWASSKPLHSRELCTMRTSSVTLLSSSLQLKRDMFSNAS
SLVEGSPLAGGNTSSLRVGIKKEWSKEAERLQREKMKVLGIKSTKENVAKYAKEKIQGVS
VDEVHGFRKETMIQTQNSRNKILSNFEDGGTRLPCEPHGQDERFSQNGKFDVVTENGAPS
GMAYGNNKSVGVKKVNGQTSDGSRQLGLSSTKSLEKVVKFNGSKSGKLMEARPNGSKSMK
TVKPKPNGSKLGKIVEGTRKTNSEANVEEASVVINKDSAKSEASRPNIHSRLTSIYGKVL
VVNSISVAKKIVQKLTSQYRHLVHACDTEVAKIEVKQETPVDHGEIICFSIYSGPEADFG
NGKSCIWVDVLDGGGKELLIEFAPFFEDPSIKKVWHNYSFDNHVIENYGLKVSGFHADTM
HLARLWDSSRRIKGGYSLEALTGDPKVMSGAQLCDEIELIGKVSMKTIFGKRKLKKDGKP
GKIVTIPPVEVLQKEEREPWICYSALDAISTLKLYESLKNHLSMKPWQIDGNLAPGKTMF
NFYETYWQPFGEILVKMETEGMLVDREYLAEMEKLAKAEQEVASNRFRKWASKYCKDAKY
MNVGSDAQLRQLLFGGTLNSKDPNESLPEERVFRVPNINKVVEDGKKAPTKFRTIKLRSI
GVKLSTDLYTATGWPSVSVDALKVLAGKVSADFDIVDDAEESQFDDDIGNDYKAATDVSE
KEEPEEPKAVDSSAYGTAFTAFADSKLEEEGREACHAIAALCEVCSIDSLISNFILPLQN
QPALEKDRYKIRQAFIAAPGNSLIVADYGQLELRILAHLANCKSMLDAFKAGGDFHSRTA
MNMYPHIREAIEKKQVLLEWDPQPGEEKPPVPLLKDAFGSERRKAKMLNFSIAYGKTPVG
LARDWKVSVEEARKTVELWYNERKEVLTWQEERKKEAERDGCVRTLLGRARCFPSMRHAT
RSQRGHIERAAINTPVQGSAADVAMCAMLEISNNETLKELGWRLLLQVHDEVILEGPSES
AEVARAVVIECMSKPFGGVNFLKVDLAVDAKCAQNWYSAK |
|---|
| NT seq |
3363 nt +upstreamnt +downstreamnt
atgttcaggcccacttgtctcagaacccaaataaacccccatcaaaacccaccgtattta
cagctttgccatataacgacacccagcctggctcctccttgtttatccaactgtgggagt
aagctcggcagagttacagagctcatcatggctatgggggtctcctcgtcctcctccttc
caaaccaccatcccttcttggccgcgctcttccattcttgttgcttcctcttcttgctcg
ttcttctgggcttcctctaaacctctccacagtagagaactctgcacaatgcggacttca
agtgttacattgcttagtagttcccttcaacttaaacgagatatgttctctaacgccagt
tcattggttgaaggaagtcccttagcagggggaaacacatctagcttaagggttgggatc
aaaaaggaatggagcaaagaggctgaaaggctgcaaagagagaaaatgaaagtccttggt
attaagtctaccaaagaaaatgtggcaaaatatgccaaagaaaagattcagggtgtttct
gttgatgaagtgcatggctttaggaaagaaacaatgatccagacacaaaactcaaggaac
aaaatcctgtcaaattttgaggatgggggtacgaggctaccatgtgaaccccatggtcag
gatgaaagattttctcaaaatggaaaatttgatgttgttacagagaatggtgctccaagt
gggatggcttatggcaacaacaaaagtgttggtgtgaagaaggtcaatggtcaaaccagt
gatggttcaagacaattgggattgtcctctactaaaagtttagagaaggttgtcaagttc
aatgggtcaaagtcagggaagcttatggaggccaggcctaatgggtcaaaatcaatgaag
actgtgaagcccaagcctaatggatcaaaattggggaagattgtggagggcacaagaaag
acaaattcggaagctaatgtggaagaagcttctgttgtgattaataaggattcagctaaa
tctgaagcctctcggccaaatattcattcacggctgactagcatatatggtaaagttctt
gttgtgaacagtatatccgttgcaaagaaaatcgttcaaaagcttacaagtcaatacagg
catcttgttcatgcatgtgacacagaggtggctaagattgaggtgaagcaagaaactcct
gttgatcatggtgaaataatatgtttcagtatttattctggaccagaagcagattttgga
aatgggaagtcctgtatctgggtggatgttcttgatggtggaggcaaggaacttttaatt
gaatttgccccatttttcgaagacccctctattaagaaggtttggcacaattacagcttt
gacaaccatgttatagagaactacgggcttaaggtttctggttttcatgccgacacaatg
catctggctcgtttatgggattcatcaaggcgaataaaaggtggttattctcttgaagca
ctgacaggtgatccaaaagtcatgtctggggcacaactgtgtgatgaaatagagttaatt
ggtaaagtatcaatgaaaaccatatttggcaagagaaaattgaaaaaagatggaaaacca
ggaaagattgtcactattccccctgttgaagtgcttcaaaaagaagagcgggaaccatgg
atttgttattctgccttggatgcaataagcacacttaagctctatgagagtttgaaaaac
catctgtccatgaagccatggcaaattgatggaaaccttgctcctggaaaaaccatgttc
aatttctatgagacttactggcaaccatttggtgagattctagttaagatggaaactgag
ggaatgctggttgatcgggaatatcttgctgagatggagaagttggccaaagctgagcag
gaggttgcttctaataggttccggaagtgggcttccaagtattgcaaagatgccaaatac
atgaatgtgggaagtgatgcacaactacgtcagcttttgtttggtgggactctgaatagt
aaggacccaaatgagagtctaccagaggaaagggtttttagagttccaaacattaataaa
gtggttgaagatggcaagaaggctcccacaaagttccgcactattaaattgcgtagtatc
ggtgttaaattgtcaactgacttgtatacagcaactggttggccttcagttagtgttgat
gctttgaaggttcttgctgggaaggtatctgctgattttgatattgtggatgatgctgaa
gagtcacagtttgatgatgatattggaaatgattataaggcagcaactgatgtctcagaa
aaagaagaaccagaggagcctaaagctgtggactcatctgcttatggaacagcttttaca
gcttttgcagattctaagttggaggaggagggaagggaagcttgccatgccattgctgct
ttgtgtgaggtttgctccattgattcactgatatccaacttcatcctcccactacagaat
caacctgctttggagaaagaccggtataagatccgtcaggcattcatagctgcacctgga
aattcccttattgttgctgactacggacagctggaacttaggattcttgctcatcttgcc
aattgtaagagcatgctggatgcatttaaagctggcggagattttcattcaagaactgca
atgaatatgtaccctcatattcgtgaagccattgagaaaaagcaagtgcttcttgagtgg
gatcctcaacctggcgaagagaaacctccagtaccattgttgaaggatgcctttggttct
gaaagaaggaaagctaaaatgcttaacttttccattgcatatgggaaaactccagttgga
cttgctcgggactggaaggtttctgtagaggaagcaagaaaaactgttgaactctggtac
aatgaaagaaaagaagtgttgacctggcaagaagaacgtaaaaaggaagctgaaagagat
ggatgtgttcgcacattgctaggacgggctcgctgttttccttcaatgcggcatgctact
cgttctcaaagaggtcatattgaaagggctgctattaatactcctgttcagggtagtgct
gctgatgtagccatgtgtgccatgttagaaatatccaataacgaaactttgaaggagctt
gggtggaggcttcttttacaggttcatgatgaagtgatcttggaagggccatcggagtct
gctgaggtcgccagggctgtagttatagagtgcatgtccaaaccctttggtggtgtaaat
ttccttaaagttgaccttgccgttgatgccaagtgtgcacaaaactggtattctgcaaag
taa |
|---|
