Ziziphus jujuba (Chinese jujube): 107432549
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Entry
107432549 CDS
T04794
Name
(RefSeq) probable E3 ubiquitin-protein ligase ZFP1 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zju04121
]
107432549
Enzymes [BR:
zju01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107432549
Ubiquitin system [BR:
zju04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107432549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_11
zf-RING_5
zf-C3HC4_3
zf_RING_Vps8
zf-RING_Vps41
zf-ANAPC11
zf-RING_16
PHD_NSD
zinc_ribbon_16
zf_RING_Vps8_fungal
zf-C3H2C3
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
107432549
NCBI-ProteinID:
XP_015899193
UniProt:
A0A6P4BA49
A0A6P4ARH2
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All DBs
Position
11:join(12858882..12859686,12860019..12860410,12860564..12860662,12860776..12860943,12861106..12861252)
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AA seq
536 aa
AA seq
DB search
MGQRNMLCTNQIIDLEMDQQGQGYLYPGPSIHLGATANFPQPNMRTMVTATRNTANFDTQ
YLPERHDNAMFYGMTQYNTAQHHHNLDLGMTAPANFYYPYITPSSSAGVLPVPLNAVGIS
ADDYGRNANFVDDVRGPCKRKTPEGFPGNYQHYNASASHNSSMLPLNARHPDGVAVMDAA
SFSLPPYIGTGNPSVIDVGPQSGVRNRLGASGLDSVLTHDHNHLNQGNYMSQHFQPTGTL
WLEQHISSSSGDPGASAWNQAPSIPFVHGGNVSVGSLETANMGMARYHETATGRSSQGMR
HPSSGNHRLQNHHPSPSMQGPRGHNIHFHPQVAASSFRISSNSSRNIMNSSQNLLEVGHR
QSGTVPPTGFRISRPNRGVIPENALRHQNLPHLRLFQADEVAILEIPDLYEVGNFTDHHR
DMRLDIEDMTYEELLALGERIGNVSTGLSEDAIIRQLKLRTYFSSSTTINLEEAEWTVKE
AEACIICQDEYKNMEKIGTLKCGHEYHAECLKKWLLIKNVCPICKSEALGTGRNDL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgggccaaagaaatatgctatgcaccaatcagattattgatctagaaatggatcaacaa
ggccaaggttatctctatcccgggccatccatccatttgggggccacagcaaacttccct
cagccaaatatgcgcacaatggtcacagctacaaggaacactgctaactttgatacccaa
tatttgcctgagcgtcatgacaatgcaatgttttatgggatgacacagtacaacactgct
caacatcaccataatcttgatttaggcatgacagctccagccaacttttattatccttac
attacgccttcatctagtgctggcgtgttacctgttcctttaaatgctgttggaatttct
gcagacgattatggaaggaatgctaactttgtggatgatgtcagaggtccatgcaaaaga
aaaactcctgaaggctttccaggaaattatcaacattataatgcctctgcaagccataat
tcgtcaatgcttcctttgaatgcaaggcatcctgatggggttgctgtgatggatgctgca
tctttttcgctgcctccgtacataggaactggaaacccgtcagttatagatgtaggacct
cagagtggtgtgaggaataggttgggtgcttctggtttggattctgttctgacgcatgac
cataatcatcttaatcaaggaaactacatgagtcagcactttcagccaaccggtactctc
tggttagaacaacacataagcagcagttctggtgatcctggtgcttcagcttggaatcaa
gccccttctataccttttgtgcatgggggaaatgtcagtgtaggttctttagagactgca
aatatgggtatggcaagatatcatgaaacagcaaccggtagaagttctcaaggtatgcgg
catccttcttcaggcaaccacaggcttcagaatcatcatccatcaccgtctatgcaagga
ccaagaggccataatattcatttccatccccaagtggcagcatcttcatttagaatttcc
tcaaattcatcacgtaatattatgaattcatctcagaatcttttggaggtaggtcatagg
caatcaggtactgttccgccaactggcttcaggatatcccggcctaatcgaggagtcatt
cctgagaacgctttgaggcatcagaaccttcctcacttgagacttttccaggctgatgag
gttgcaatactagagattccagatctctatgaagtgggaaatttcactgaccaccacagg
gacatgcgcttggatatagaggatatgacttatgaggaacttcttgcacttggggagagg
attggcaatgtaagcactgggttatctgaggatgccattatccgtcaactaaagttgagg
acttatttctcatcttcaaccactataaacttagaagaggctgaatggacggttaaggaa
gctgaggcttgcattatatgtcaggatgaatataaaaacatggagaagattggaacgctg
aagtgcggacacgaatatcatgcagaatgtttaaagaagtggttgctaattaagaatgtg
tgccctatctgcaaatctgaagcattgggcacaggaaggaatgatttatag
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