KEGG   Ziziphus jujuba (Chinese jujube): 107433036
Entry
107433036         CDS       T04794                                 
Name
(RefSeq) cleavage stimulation factor subunit 77 isoform X1
  KO
K14408  cleavage stimulation factor subunit 3
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107433036
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107433036
Messenger RNA biogenesis [BR:zju03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     107433036
SSDB
Motif
Pfam: Suf HAT_PRP39_N HAT_PRP39_C HAT_Syf1_CNRKL1_N TPR_14 TPR_19 HAT_Syf1_CNRKL1_C TPR_15 TPR_2 TPR_16 TPR_Slam Iml2-TPR_39 TPR_CcmH_CycH TPR_9
Other DBs
NCBI-GeneID: 107433036
NCBI-ProteinID: XP_048321207
UniProt: A0ABM3I5U7
LinkDB
Position
11:complement(join(20254747..20254910,20255210..20255419,20255788..20255931,20256156..20256257,20256343..20256406,20259147..20259296,20261106..20261165,20262907..20263003,20264014..20264078,20264507..20264647,20265678..20265746,20265861..20265919,20266122..20266242,20267737..20267800,20269106..20269152,20269617..20269745,20269885..20270025,20270219..20270280,20271873..20271973,20273484..20273593,20274125..20274187,20274312..20274416))
AA seq 755 aa
MEDGTEPESKTSASNKDMDDKYNVEAAEARANEALRLPITEAAPIYEHLLTVFPTAAKYW
KQYVEAHMVVNNDDATKQIFSRCLLNCLHIPLWRCYIQFIRKVNDKKGVEGQEETKKAFD
FMLSYVGADIASGPVWMEYIKFLKSLPAINTQEESLRMTAVRKVYQRAIVTPTHHIEQLW
REYENFENSVSRQLAKGLISEYQPKFNSARAVYRERKKYLDEIDWNMLAIPPTGSYKEEM
QWMAWKKLLAFEKGNPQRIDNVSSNKRIIFTYEQCLMYLYHYPDVWYEYATWHAKSGSID
AAIKVFQRALKALPDSQMLRYAYAELEESRGAIQSAKRIYESLLGNGVSTTSLAHIQFIR
FLRRTEGVEAARKYFLDARKSPDCTYHVYVAYAMMSFCLDKDPKMAHNIFEAGLKRFMHE
PVYILEYTDFLIRLNDDRNIRALFERALSSLQPDESVEVWKRFTHFEQTYGDLASMLKVE
QRRKEALSRNEEDPSTLEVSLQDVVARYSFMDLWPCSTKDLDHLARHEWLTKNTDKKVKS
AISNGSGFIDKGTTGLVSNATGSTKVIYPDTAQMVIYDPRQKPVPAVPAGLSTLSNPVAA
VSGQTTKAFDEILKATPPALLAFLANLPAIEGPTPDVDVVLSICLQSDIPIAQPGKSGSA
TTKLPSGPGPSTSDLSGSSRSHPLLSGSSFKPTRGKRKEIDRQDDDETTTVQSQPLPRDA
FRIRQYQKAARGSASQTGSASYGSAISGDLSGSTG
NT seq 2268 nt   +upstreamnt  +downstreamnt
atggaggatggtactgaacctgagtcaaagacatcggcgagtaataaagacatggatgat
aaatacaatgttgaggccgccgaagctcgagcaaacgaggctctgcgtttgcccattacc
gaggccgcaccgatatacgagcaccttttgacagtgttccctacagctgcaaagtattgg
aagcagtatgtggaggcacacatggttgtgaataatgatgatgccactaaacagatattt
agccggtgtttattgaattgtctacacattccactttggcggtgctacattcaattcatt
agaaaggtcaatgacaagaagggtgtagagggtcaagaagaaactaaaaaagcttttgat
tttatgctcagctatgttggagcggatatagcatctgggcctgtttggatggagtatatc
aagtttttaaagtcattgccggcaataaacacacaggaagagtcgctgcggatgactgct
gtgcggaaagtataccaaagagctattgttactcctacccatcacattgaacaactctgg
agagaatatgaaaattttgaaaattctgtcagcagacaactggcaaaagggcttatttct
gaatatcaacccaaatttaacagtgctcgggctgtctacagagagcggaagaaatatctt
gatgaaattgattggaatatgcttgctatacctccaactggttcttacaaggaagaaatg
caatggatggcatggaaaaagttgttagcttttgaaaaagggaacccacaaagaatagac
aatgtatcgtccaacaaacgaataatattcacgtatgaacagtgtttgatgtacttatac
cattatcctgatgtatggtatgagtatgctacatggcatgcaaaaagtggttccatagat
gctgcaattaaagtatttcagagagctttgaaggctcttcctgattcacagatgttaagg
tatgcttatgcagagctggaggaatcccgtggtgcaattcagtctgcaaagagaatatat
gagagccttctagggaatggtgtcagcacgacatcacttgcacatatacaatttattcgc
tttcttaggaggactgaaggagttgaagcagctcggaagtactttcttgatgcgcgcaaa
tccccagattgtacataccatgtttatgttgcctatgcaatgatgtccttttgccttgac
aaggatccaaagatggcacacaacattttcgaagctggattgaaacggtttatgcacgag
cctgtctacattcttgaatatacagattttttgatacgtctgaatgatgataggaatatc
cgggctttatttgagcgggcactaagctcactacaaccagacgaatcggttgaggtttgg
aaacggttcacccattttgaacaaacttatggagatttggctagcatgttaaaggttgag
caaagaaggaaagaagcactttctagaaatgaagaggatccatcaactttggaagtttca
ttacaagatgttgtagcacgatacagcttcatggatctttggccatgctctactaaggat
ttggatcatttggcgcggcatgagtggcttactaaaaatacggacaagaaagtgaagtca
gctatttccaatggatctggatttatagacaagggcacaacgggtttagtaagcaatgca
actgggtctacaaaggttatttatccagatactgctcaaatggtgatctatgatcctagg
caaaagcctgtacctgcagttcctgctggtttaagcaccttgtcaaatcccgttgctgca
gtgagtggtcaaacaacaaaggcatttgatgaaatattaaaagcaacaccacctgctttg
ctagccttcttagcaaatttgcctgctattgagggtccaacaccagatgtggatgttgta
ttgtccatttgtctgcagagtgacataccaatagcgcaacccggaaagtctggttcagcc
acaacaaaattgccatctgggcctggtcctagtacaagtgacctctctggttcaagcaga
tctcatcctctcctgagtggttcatctttcaagcctactaggggaaaaaggaaagaaata
gataggcaagatgacgatgagactacgacggttcagagccaaccattgccaagagatgct
ttcaggatacggcagtaccagaaagcagctagaggtagcgcttcacaaacaggatcagca
tcatatggaagtgcaatttccggagatctatctggtagcactggctaa

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