Ziziphus jujuba (Chinese jujube): 107433202
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Entry
107433202 CDS
T04794
Name
(RefSeq) uncharacterized protein LOC107433202
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107433202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zju03009
]
107433202
Ribosome biogenesis [BR:
zju03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
107433202
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
Beta-prop_ACSF4
Utp12
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
CFAP251_N
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
PQQ_2
Beta-prop_NOL10_N
NBCH_WD40
Beta-prop_NUP159_NUP214
RME-8_2nd
Motif
Other DBs
NCBI-GeneID:
107433202
NCBI-ProteinID:
XP_048321361
UniProt:
A0ABM3I633
LinkDB
All DBs
Position
11:join(27207547..27207636,27207801..27207944,27208093..27208211,27208329..27208483,27208695..27208783,27208878..27209421,27209715..27209816,27210159..27210322,27210531..27210610,27210903..27211014,27211267..27211341,27211426..27211566)
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AA seq
604 aa
AA seq
DB search
MGSSNIRDLLTAFSPLQDFVAISAGDGRIKIWDTVKGQVQTEFTDIMESEETSIYKKQER
GHLSVDYTCMKWFSSEAKKKKRKIGDSFLVLGTASGDVLALDVSAGQLKWKINDCHPGGV
SAVSFSRKGSCIYAAGSDGMVCQIDPMSGNLLGKFKASTKAISSMSVSPDGNILATAAGR
LRIFNCSNVKKIQKFSGHPGAVRCLIFSEDSKYVLSSAVGERYVAIWNIGGSKSVSCVLA
MEHPAVFLDSRCIHSGEDDNAGLCVLAISEIGVCYLWFGQNVDELRNTKPTKISISSEDI
SLKSHNAALPTIFAAILRGFSKPASGKIFVAYGQLVKPSFEKILLHSGTDIELSTSHDGV
LLPMSQYLSKSKKGQDVQNRVIALDRANAEDALLPIPKILDPDRKSDAEFMKSEDDMVEM
ELDTEAICIEDRLRSLGILSKEDNSASKSKVNSNIFNGVDLKVNMPQKKMKAVVLSKIPD
DAYKLLGVLVAMWQSRLCSGKHVLPWIYSILVNHSHYVVSQEPATQLLNSLVKVAKSRGA
AIQPLLQLSGRLQLLTAQINKATQAKTQFDHEHQMDETDDDDVDEILYREEEEEESELSS
DNDE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgtcgaatattagagacctcttgacggcgtttagtcctttgcaggacttcgtc
gccattagcgccggtgatggtcgaattaagatatgggacactgtgaagggtcaggttcag
accgagtttacggacatcatggaatcggaagagacaagcatatataagaagcaagaaaga
gggcacctttcagttgattacacgtgcatgaagtggttctcttcagaagcaaagaagaaa
aaaaggaagattggagattcatttttagttttaggaactgccagtggtgatgttttggct
cttgatgtgtctgctgggcagttaaaatggaaaatcaatgattgtcatcctgggggtgtt
agtgctgtatcattttcgagaaaaggttcatgcatttatgcagctgggtccgatgggatg
gtttgccaaattgatcctatgtcgggaaatctgttgggaaagttcaaagcttccacaaag
gcaatatcttctatgtctgtttcaccagatggcaatatattagcaactgcagctgggaga
ttaaggattttcaattgttctaacgtcaagaagatacagaagttttctggtcatccagga
gctgttcgctgtttgattttttctgaagatagtaagtatgtgctatcatctgctgttggt
gaaagatatgttgcgatatggaatataggtggtagcaaatcagtaagctgcgtactagca
atggagcaccctgctgttttcctagatagcaggtgtattcacagcggagaagatgataat
gctggtctatgtgtgttggccatttcggaaattggtgtttgttatctttggtttggacag
aatgttgacgaattaaggaatactaagcccacaaaaatctcaatatcttctgaagatatt
tccttgaaaagtcataacgctgcattacctacaatatttgctgctatattgcgaggcttt
tctaaacctgcttctgggaagatatttgttgcatatggacaactagtaaagccatcattt
gaaaaaattctgttgcattctggtacagacatagagttgagtacttcccatgatggggtt
cttctaccaatgagtcagtatctttctaaatccaaaaaaggacaagatgtacaaaataga
gttattgcgttggaccgtgcaaatgctgaggatgctttacttcctatcccaaagatattg
gatcctgacaggaaaagtgatgctgagtttatgaagagcgaagatgacatggtagaaatg
gaacttgacactgaagcaatctgcatagaggaccggctaaggtcattaggaattcttagt
aaagaagataatagtgcatcaaagtccaaagttaactccaatatatttaatggtgttgat
ctaaaagttaatatgccacaaaagaagatgaaggcagttgttttgtcaaaaatacctgat
gatgcatacaaattactaggagtcttggtggccatgtggcaatcaagattgtgtagtgga
aagcatgttcttccatggatttacagcatattggtgaatcatagtcattacgtggtttct
caagaaccagctacgcaattgctaaactccttggtcaaggttgcaaaatctagaggtgct
gcaattcaacctttactacaattgtcaggtcgtttgcaacttttgacagcacagattaat
aaggcaacccaagccaaaacgcaattcgaccatgagcaccagatggatgaaactgatgat
gatgatgtagatgaaattctctatagggaagaagaagaagaagaatctgaattaagcagt
gacaatgacgagtag
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