Ziziphus jujuba (Chinese jujube): 107433417
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Entry
107433417 CDS
T04794
Name
(RefSeq) serine/arginine-rich splicing factor RS41 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107433417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zju03041
]
107433417
Spliceosome [BR:
zju03041
]
Common components
Common spliceosomal components
SR proteins
107433417
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RNA_bind
SET_assoc
RRM_MUD2_C
RRM_Nup35
DUF2129
Cucumo_2B
Motif
Other DBs
NCBI-GeneID:
107433417
NCBI-ProteinID:
XP_015900189
UniProt:
A0A6P4AWE1
LinkDB
All DBs
Position
3:complement(join(33208467..33208521,33208847..33209110,33209490..33209725,33210165..33210277,33211765..33211870))
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AA seq
257 aa
AA seq
DB search
MKPVFCGNLDFDSRQSDVEKLFRRYGKVDKVDMKSGFAFVYMEDERDAEYAIRRLDRTEF
GRKGRRLHVEWTKQERGIRRPSDSKRSSANMRPSKTLFVINFDPIHTRTRDLERHFDSYG
KILNIRIRRNFAFIQFESQEDATRALDSTNLSKFLDRVISVEYAVRDDDDRRNGHSPDRR
GRGVSPDKRSNDRGRSPSPYRRDRASPDYGRGSHPSSRLEPRGSPDYDGASSPVNDRYHS
SSRSRSRSPPLRERSRS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccgtattttgtggaaacttagactttgattctcgtcagtctgatgttgagaag
ctttttagaagatatgggaaggttgataaggtggacatgaagtctggatttgcttttgtc
tatatggaggatgagcgagatgctgaatatgcaatacgaagacttgacaggacagaattt
ggtagaaaggggcgacgacttcatgttgagtggactaagcaagaacgtgggattagaaga
cccagtgactcgaaaagatcttcagcgaacatgagaccatcaaaaaccttgtttgttatt
aactttgacccaattcatactagaacaagagatctggagaggcactttgattcgtatggg
aaaatactgaatataaggataagaagaaattttgcatttattcagtttgaatcacaagag
gatgctacaagagcattggattcaacaaacttgagcaagtttctagatcgagtcatatca
gttgaatatgctgtccgtgatgatgatgacagaagaaatgggcacagtcctgataggaga
ggccgtggtgtgtctcctgataaacgaagcaatgatcgtgggagatccccaagtccatac
cgtagagatagggctagtcctgactatggccgtggatctcatccaagttctagacttgaa
ccaagaggaagtcctgattatgacggagcttcaagcccagtcaatgatagatatcacagc
agcagccgtagccgcagccgttcacccccactgcgggaaagatctcggtcctga
DBGET
integrated database retrieval system
