KEGG   Ziziphus jujuba (Chinese jujube): 107434168
Entry
107434168         CDS       T04794                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107434168
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107434168
   03041 Spliceosome [BR:zju03041]
    107434168
Messenger RNA biogenesis [BR:zju03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     107434168
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107434168
Spliceosome [BR:zju03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    107434168
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 BRAP2 Ntox35 HSP90
Other DBs
NCBI-GeneID: 107434168
NCBI-ProteinID: XP_015901084
UniProt: A0A6P4AR45
LinkDB
Position
1:complement(join(40643778..40644293,40644570..40644739,40644896..40644995,40645143..40645306,40645943..40645983,40646239..40646294))
AA seq 348 aa
MGSKSKNDNPHTGDGASPGKIFIGGLAKDTNYATFNKHFGKYGEIVDSVIMKDRFTGQPR
GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSSCTE
DEFKSFFAKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDELLSKGNMIDMAGTQVEI
KKAEPKKASNPPPAPAYGSNSRARSFNDGFGGFGGSYGGFDGGYGPGPYRTPAGLGSRLG
GGYGYGSASGEFGGGYGSFGSSSLGGYRGESSLGYTSRYGPYGGGFGGGYGASSLGGYGR
GGEGYGGYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgggttcgaaatcgaagaacgataatcctcatacaggcgatggagctagccccggaaag
attttcattggagggttggcgaaagatacgaattacgctacatttaacaagcactttggg
aaatatggagagatagtggactcggtcattatgaaagatcgtttcacgggtcagcccagg
ggttttggttttatcacttatgctgatccttcagttgttgacaaggttattgaggacacc
catgttataaacggaaaacaagttgagattaagagaaccatccctaaaggccaaggccaa
tcaaaggattttaaaacaaagaagattttcgttggtgggattccatcatcatgcaccgaa
gatgagttcaaaagtttctttgcgaagtatggcaaggtggtggaacaccaaatcatacga
gatcatgaaactaaccgctctcgaggctttggatttataatttttgacagtgaagaagtt
gtagatgaattgttatccaagggaaatatgattgatatggctggtactcaggtggagatc
aagaaagccgaaccaaagaaagcctctaatccaccgcctgcccctgcatatggtagcaac
tctagggctcgttctttcaatgatggctttggtggatttggcggttcgtatggaggtttt
gatgggggatatggcccaggtccctataggacgcctgctggtcttggcagtaggcttggt
ggtggatatggttatggtagtgctagtggcgagtttggtggtggttatgggagttttggc
agcagtagcttaggtggttatcgaggtgaatcttcccttggttatactagtcgctatgga
ccatatggtggtggttttggtgggggttatggtgcaagcagtttaggtggatatggtcga
ggtggtgaaggctatggtggatatggcagttcaggctatggtggtggttatgactctggg
cctggtgctagttatggtggagcaggtgggctgtatggaagaggaggctatagtggcagt
agtcggtaccatccctacgcaaggtag

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