KEGG   Ziziphus jujuba (Chinese jujube): 107434586
Entry
107434586         CDS       T04794                                 
Name
(RefSeq) oligouridylate-binding protein 1B isoform X1
  KO
K13201  nucleolysin TIA-1/TIAR
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107434586
   03041 Spliceosome [BR:zju03041]
    107434586
Messenger RNA biogenesis [BR:zju03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     107434586
Spliceosome [BR:zju03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    107434586
SSDB
Motif
Pfam: RRM_1 RRM_PARP14_3 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 107434586
NCBI-ProteinID: XP_048329396
LinkDB
Position
1:complement(join(41614939..41615226,41616007..41616183,41616792..41616877,41617140..41617259,41617407..41617437,41617541..41617616,41617789..41617876,41617994..41618055,41618153..41618229,41618343..41618445,41618964..41619025,41620110..41620220))
AA seq 426 aa
MQHQRLKQQQQQAMMQQALLQQHSLYHPGLLAPPQVRIEPIPSGNLPPGFDPSTCRSVYV
GNIHTQVTEPLLQEVFASTGAVESCKLIRKEKSSYGFVHYFDRRSAALAILSLNGRHLFG
QPIKVNWAYTSGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR
SRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAVSNEDKQSSDAKSVVELTN
GSSEDGKETTNSEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHALGAGLIEEVRVQRDKG
FGFVRFSTHAEAALAIQMGNTQSLLCGRQIKCSWGSKPTPPGTTSNPLPPPAAVPIPGLS
ASDLLAYERQLAMSKMGAGVHALMHPQGQHPLKQAAMGMGAAGASQAIYDGGFQNVAAAQ
QLMYYQ
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgcagcaccagaggctgaagcagcagcagcaacaagctatgatgcaacaagctcttctt
cagcaacactctctctaccaccctggccttctagctcctcctcaggttcggattgagcca
atcccaagtggaaatctgcctcctggttttgatccaagtacttgccgcagtgtgtacgtt
gggaacatccatacgcaggtaacagaaccactccttcaagaggtttttgcgagtactggt
gctgttgaaagttgcaaacttataagaaaggaaaaatcatcatatggattcgttcactat
ttcgatcgcagatcagctgcccttgctatattgtctctcaatggaaggcatctgtttggg
cagcctatcaaagtaaactgggcatatactagtggtcagagggaggatacatcgggtcat
ttcaacatttttgttggtgatctaagccctgaggttactgatgctacattgtttgcttgc
ttttctgtttatcccagttgttcagatgcaagggtaatgtgggatcagaagacagggcgt
tcaagagggtttgggtttgtttcattcaggaaccaacaggatgcccaaagtgcgataaat
gacttaaccggaaagtggcttggcagtaggcaaatacgttgtaactgggcaacaaaaggt
gctgtttcaaacgaagacaagcagagctccgatgcaaaaagtgtggttgaactaacaaat
ggctcatcagaagatggtaaggagacaacaaatagtgaagctccagagaacaaccctcag
tacactactgtttatgttggcaatcttgctcctgaggtcactcagcttgatctccatcgc
cactttcatgcgcttggtgctggtctgattgaggaagttcgagtccagcgtgataagggt
tttggttttgtgaggttcagtactcatgctgaggcagctctagcaattcaaatgggaaat
acccaatctcttctatgtgggagacaaattaagtgctcttggggtagcaagcccactcca
ccagggacaacttcaaacccactgcctccacctgcggctgtgcctatacctggcctctct
gcctctgacctcttggcctatgagcgacagctagcaatgagcaagatgggggccggtgtt
catgccctcatgcatccacaggggcagcatcctcttaagcaggcggcgatgggcatgggt
gctgctggggcaagccaggctatatatgatggtgggttccagaatgttgctgccgctcag
cagcttatgtactaccagtaa

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