KEGG   Ziziphus jujuba (Chinese jujube): 107435307
Entry
107435307         CDS       T04794                                 
Name
(RefSeq) TATA-binding protein 2
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107435307
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:zju03000]
    107435307
   03021 Transcription machinery [BR:zju03021]
    107435307
Transcription factors [BR:zju03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    107435307
Transcription machinery [BR:zju03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     107435307
  RNA polymerase III system
    TFIIIB
     107435307
  RNA polymerase I system
    SL1/TIF-1B
     107435307
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 107435307
NCBI-ProteinID: XP_015902368
UniProt: A0A6P4BSR1
LinkDB
Position
3:complement(join(34081284,34081406..34081479,34081566..34081667,34082183..34082275,34082402..34082446,34083519..34083569,34083961..34084032,34084488..34084575,34085746..34085816))
AA seq 198 aa
MGEQVGVEEVDRDKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIM
RIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSC
DVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDDTY
MAFENIYPVLTEFRKVQQ
NT seq 597 nt   +upstreamnt  +downstreamnt
atgggagaacaagttggagtggaagaggtcgatcgagacaagcacccatctggaattgtt
cccactcttcagaacattgtatccacagttaacttggactgcaagttggatcttaagaca
attgcgttgcaagctcgtaatgcagaatacaaccccaagcgttttgctgctgtcataatg
aggataagggaaccaaaaactacagctttgatctttgcctctggaaagatggtttgcaca
ggtgccaaaagcgaacaacagtcaaaactggcagcaaggaagtatgcccgtattatccaa
aaacttgggtttcctgctaaatttaaggacttcaagattcaaaacattgttggctcctgt
gatgttaaatttcctatcagacttgaaggtcttgcatactcccatggtgccttttcaagt
tatgaaccggaactgtttcctgggctgatatatcgaatgaagcagccaaagattgtactt
cttatttttgtgtcagggaaaattgtgcttacaggggcaaaggtgagagatgacacatat
atggcctttgagaacatatatcctgttcttacagagttcaggaaggttcagcaatga

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