Ziziphus jujuba (Chinese jujube): 107435307
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Entry
107435307 CDS
T04794
Name
(RefSeq) TATA-binding protein 2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107435307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zju03000
]
107435307
03021 Transcription machinery [BR:
zju03021
]
107435307
Transcription factors [BR:
zju03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
107435307
Transcription machinery [BR:
zju03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107435307
RNA polymerase III system
TFIIIB
107435307
RNA polymerase I system
SL1/TIF-1B
107435307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
107435307
NCBI-ProteinID:
XP_015902368
UniProt:
A0A6P4BSR1
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All DBs
Position
3:complement(join(34081284,34081406..34081479,34081566..34081667,34082183..34082275,34082402..34082446,34083519..34083569,34083961..34084032,34084488..34084575,34085746..34085816))
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AA seq
198 aa
AA seq
DB search
MGEQVGVEEVDRDKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIM
RIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSC
DVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDDTY
MAFENIYPVLTEFRKVQQ
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgggagaacaagttggagtggaagaggtcgatcgagacaagcacccatctggaattgtt
cccactcttcagaacattgtatccacagttaacttggactgcaagttggatcttaagaca
attgcgttgcaagctcgtaatgcagaatacaaccccaagcgttttgctgctgtcataatg
aggataagggaaccaaaaactacagctttgatctttgcctctggaaagatggtttgcaca
ggtgccaaaagcgaacaacagtcaaaactggcagcaaggaagtatgcccgtattatccaa
aaacttgggtttcctgctaaatttaaggacttcaagattcaaaacattgttggctcctgt
gatgttaaatttcctatcagacttgaaggtcttgcatactcccatggtgccttttcaagt
tatgaaccggaactgtttcctgggctgatatatcgaatgaagcagccaaagattgtactt
cttatttttgtgtcagggaaaattgtgcttacaggggcaaaggtgagagatgacacatat
atggcctttgagaacatatatcctgttcttacagagttcaggaaggttcagcaatga
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