KEGG   Ziziphus jujuba (Chinese jujube): 107435630
Entry
107435630         CDS       T04794                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH3
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107435630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107435630
   03012 Translation factors [BR:zju03012]
    107435630
Enzymes [BR:zju01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     107435630
Messenger RNA biogenesis [BR:zju03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     107435630
Translation factors [BR:zju03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    107435630
SSDB
Motif
Pfam: OB_NTP_bind HA2_C dsrm HA2_N Helicase_C Gag_FV_central
Other DBs
NCBI-GeneID: 107435630
NCBI-ProteinID: XP_060675752
LinkDB
Position
8:complement(join(6523000..6523471,6524229..6524339,6524442..6524594,6525372..6525431,6525517..6525821,6526250..6526402,6526511..6526580,6526877..6527080,6527860..6528123,6528222..6528229,6528370..6528395))
AA seq 607 aa
MVQWQHMNSCTYILLSGYSFQIIFLIIFGCHFLQKLIFERPPHNVHKVVLATNMAEASIT
INDRVFVIDCGKAKETTYDALNNTPCLLPSWISQASAQQRRGRAGRVQPRECYHLYPKCV
YEAFAEYQLPELPRTPLNSLCLQIKSLQVESIGEFLSSALQPPEPLAVQNDIGFLKMIGA
LDEKEKLTELGNFLSMLPVDPKLGKMLIMGANFRCFDPILTIVFGLSGRDPFLLPQVKKD
ITGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAYEYCWRHFISAQTLQAIHSLQKQF
SFILKDAGLVDEYASINNRLSHNQSLVHAIICSGLFPGIASVVHXETSMSFKTMDDGQVL
PYANSVNAHYQTIPYPWLVFGEKVKDNTVFIRDSTGVSDSILILFGGALNQGVQPGHLKM
FEGYVDFFMDPSLSECYLKLREELNKLIQKKLEDPSLDIHKEGKYLMLAVQELVSGDQCE
GRFVFGRDSKKPKESGNDDRFTRDGTNPKSLLQTLMMRAGHSPPKYKTKHLKTNEFSALV
EFKGMQFVGKHKKNKQLAERDAAVEALAWLTHTSDNSRDEDDKSPPDVTDNMLKLLGKRR
RSKRRSG
NT seq 1826 nt   +upstreamnt  +downstreamnt
atggttcaatggcaacatatgaacagttgcacctacattttattaagtgggtactcattt
cagatcatatttcttattatttttggatgtcattttctgcagaaactcatatttgagaga
ccacctcataatgtgcataaagtagttctcgctacaaaatatggcggaggcaagcattac
aatcaatgatagagtttttgttattgactgtggaaaagcaaaagagacaacttatgatgc
tttaaataatacaccttgtctactaccatcttggatatcacaagcatctgcacaacaaag
aaggggtagggctggccgtgtacaaccacgtgaatgttaccacctctaccccaaatgtgt
ttatgaagcttttgcagaatatcaacttccagaacttccgagaactcctttgaactctct
ctgcttgcaaataaaaagcttgcaggttgaaagtataggagaatttttgtcatctgctct
gcagccaccagaaccacttgctgtccaaaatgatattggttttctgaagatgattggagc
attagatgagaaggaaaaattgactgagcttggaaatttcttgtcaatgcttccagtaga
tcccaagcttgggaaaatgctgatcatgggtgctaactttcgttgctttgatcctattct
tacaatagtatttgggcttagtggcagggatcctttcttattgcctcaagtcaaaaaaga
cataacagggacagcaaagtctagattttctgcaaaggattacagtgatcatatggctct
tgttcgtgcatatgaaggatggaaagatgcagaaagagaaggatctgcatatgagtattg
ctggagacatttcatctcagctcaaactcttcaggctatccattctcttcagaagcagtt
tagcttcattttaaaagatgccggcttggtagatgaatatgcaagcatcaacaacagatt
aagtcacaaccaatcattagtccatgcaattatttgttctggcctttttcctggcatagc
gtctgtagtgcactgagagacatcaatgtctttcaaaacaatggatgatggccaggtttt
accatatgcaaattctgtgaatgcacattaccaaactattccttatccatggctggtatt
tggtgaaaaagttaaggacaatactgttttcatacgtgattccactggtgtctctgattc
aatactcattctttttggtggtgcactgaaccaaggagtgcagcctggacatttgaaaat
gtttgaagggtatgtcgacttctttatggatcctagtttgtcagaatgctatttgaagct
aagggaagaacttaataagctcatccaaaagaagcttgaagatcctagcctggacattca
caaggaagggaaatatcttatgcttgcagttcaggagctggtatctggagatcaatgtga
agggagatttgtatttggcagggatagcaagaagccaaaggagtctggtaacgatgacag
attcacaagagatggaacgaatcccaagagcttgcttcaaactctgatgatgagggcagg
gcactctcctccaaaatacaaaacaaagcacctcaagacaaatgagtttagtgcgctggt
agagttcaagggtatgcaatttgttggaaaacataagaaaaacaagcaagcttgccgaaa
gggatgctgctgtagaggcattggcatggttgactcatacttctgacaacagtcgagatg
aagatgacaagtccccacctgatgtgactgacaacatgcttaaacttcttgggaaacgta
gaagatcaaaacgtcggtctggttga

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