Ziziphus jujuba (Chinese jujube): 107435880
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Entry
107435880 CDS
T04794
Name
(RefSeq) amino acid transporter AVT1A isoform X1
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
107435880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zju02000
]
107435880
Transporters [BR:
zju02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
107435880
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
107435880
NCBI-ProteinID:
XP_015902999
UniProt:
A0A6P4AUS1
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All DBs
Position
11:complement(join(5237390..5237482,5238009..5238071,5238261..5238304,5238436..5238581,5238694..5238713,5238812..5238947,5239031..5239250,5239341..5239521,5239622..5239645,5239987..5240201,5240447..5240736,5241110..5241591))
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AA seq
637 aa
AA seq
DB search
MRSSVTSELPFSATQMNPLKRCTSSNKGKALKHKNKNKKRKQNQKQSTASPPSSVSLQSL
RLKKKKKSVNRGRKKKIIIIIIISEAFGGFDYCSMGDKEKERESEFFWENDEDGSYNSDI
EVLNKIESGCGSSNACNTDDDDDDDVDEQAFSSQQWPRSYRETTDSYTIAASPNFGNLGV
RVPSIRYSSFGSSTKSYVESDEKSSLLSDYDLINQKSNLDGISRAQSSWSDKVSLYRQLT
GELPIGHGCSFTQTIFNGINVMAGVGLLSTPYTVKEGGWASLGVLVLFAVICCYTASLMR
YCFESREGIITYPDLGEAAFGRYGRLLISIFLYTELYSYCVEFITLEGDNLSSLFPGTAL
DWAGFHLDSKHFFGILTALIVLPTVWLRDLRVISYLSAGGVIATVLIVLCVLLLGTTTGI
GFHHTGEVVNWRGIPFAIGVYGFCYSGHSVFPNIYQSMADKRKFTKALIICFMLCVLIYG
CVAVMGFLMFGESTLSQITLNMPPHAFISKVALWTTVINPFTKYALLMNPLARSIEELLP
AGTANSPWCYILLRTGLVISSVCAAFLLPFFGLVMALIGSLLSILVAVIMPSLCFLKILG
KKATNTQVVSSIAIATLGVVCAILGTYSSVLDIVKSY
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcgtctgtgacctctgaacttccattttcggccacgcaaatgaaccctttaaag
cggtgtacatcaagcaacaaaggaaaagcattaaaacacaaaaacaaaaacaaaaaaaga
aagcaaaaccaaaaacaaagtacagcctcacctccttcaagcgtatcccttcagtctctc
agattaaaaaaaaaaaaaaaaagcgtaaacagaggaagaaagaagaagataataataata
ataataataagtgaagcttttggtgggtttgattattgttcaatgggtgacaaggaaaaa
gagagggaatccgagtttttttgggagaatgatgaggatggcagctacaacagcgacata
gaagtactcaacaagattgagagtgggtgtggtagtagtaatgcttgcaataccgatgat
gatgatgatgatgatgttgatgaacaagctttctcttctcagcaatggcctcggagttac
agggagacaaccgattcttacacaatagcagcatcaccaaattttggcaaccttggtgta
cgtgttccaagtattagatattcaagctttggcagttctaccaaaagttatgtggagtcg
gatgaaaagtcttctttgctgtctgattatgatctaatcaatcaaaagagtaacttggat
gggatttcaagagcacagtcatcatggtctgataaagtttcactgtataggcagctgact
ggagaattacccattggtcatggatgtagtttcactcaaactatctttaatggaattaat
gtaatggcgggagttggacttctctcaacgccttacacagtgaaggaaggtggatgggca
agtttgggagtgctagttctgtttgctgttatatgttgttatacagcctctctcatgaga
tactgctttgaaagcagagaaggcatcattacttatcctgatttaggagaagctgccttt
ggaagatatggccgtcttctcatttctatctttttgtatacagagttatattcttattgc
gtggaatttataactttagaaggagacaacctcagcagtttattccctggaacagccttg
gattgggctggttttcatctggattctaagcacttctttggaattctaactgccctcatt
gttctaccaactgtttggctgagggatctccgtgtgatctcgtacctttcagccggaggt
gttattgccacagttttgatagtcctgtgtgtacttttactcggtacaactactgggatt
gggtttcaccatactggtgaagtagtgaactggagaggaattccatttgccattggtgtt
tatgggttttgctattctgggcattctgtttttccaaatatctaccaatccatggcggac
aaaagaaaatttaccaaggcactgataatctgttttatgttatgtgttttaatatatggg
tgcgtcgcagtgatggggtttctcatgttcggtgaaagtactttgtcccagataactttg
aacatgccaccacatgcctttatttcaaaagttgcgttgtggacgacggttatcaaccca
tttactaagtatgccctgttgatgaaccccctggcaaggagtattgaggagctgcttccg
gctggaactgcaaatagtccatggtgttacattttactaaggacaggactcgtgatttct
tctgtttgtgctgcctttcttcttcctttctttggacttgtgatggccttaataggttct
ctgctcagtatactggtggcagtaattatgccttcgctctgttttctgaaaattttgggg
aagaaagctacaaatacacaggttgtttcaagtatcgcaattgctacgttgggcgttgtt
tgtgcaattctgggaacatattcttccgtattagatatcgtgaagagttattga
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