Ziziphus jujuba (Chinese jujube): 125418753
Help
Entry
125418753 CDS
T04794
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03013
Nucleocytoplasmic transport
zju03015
mRNA surveillance pathway
zju03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125418753
09122 Translation
03013 Nucleocytoplasmic transport
125418753
03015 mRNA surveillance pathway
125418753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zju03019
]
125418753
03041 Spliceosome [BR:
zju03041
]
125418753
03009 Ribosome biogenesis [BR:
zju03009
]
125418753
03012 Translation factors [BR:
zju03012
]
125418753
Enzymes [BR:
zju01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125418753
Messenger RNA biogenesis [BR:
zju03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125418753
mRNA cycle factors
Stress granule specific factors
125418753
Spliceosome [BR:
zju03041
]
Complex C
Other components
EJC/TREX
125418753
Ribosome biogenesis [BR:
zju03009
]
Eukaryotic type
90S particles
Helicases
125418753
Translation factors [BR:
zju03012
]
Eukaryotic type
Initiation factors
eIF-4
125418753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
AAA_22
UvrD-helicase
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
125418753
NCBI-ProteinID:
XP_015894110
UniProt:
A0A6P4AFD4
LinkDB
All DBs
Position
12:join(1810427..1810749,1811332..1811572,1811706..1811786,1811973..1812080,1812182..1812301,1812893..1813060,1813300..1813386,1814050..1814163)
Genome browser
AA seq
413 aa
AA seq
DB search
MAAAAPRSVVPPNRTRRGGGIAAQDDKFEFETTEGVEPILSFDQMGIKDDLLRGIYGYGF
EKPSAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQLVDTSTREVQALILSPTREL
AAQTEKVILAIGSYINIQAHACIGGKSVGEDIRQLEYGVHVVSGTPGRVCDMIKRRTLRT
RAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVCLISATLPHEILEMTSKFMTDPVK
ILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR
SNNFTVSSMHGDMPQKERDAIMGEFRDGTTRVLITTDVWARGLDVQQVSLVINYDLPNNR
ELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagccgccccaaggagcgtggtgccgccgaaccgtaccagaaggggcggtggc
atagcggctcaagacgataagtttgagtttgagacgacggaaggagttgagccgattctg
agctttgatcagatggggatcaaggacgatctgcttcgaggaatctatggctatgggttc
gagaagccctcagctattcaacagcgagccgttaggcctatcattgagggacgtgatgtc
atagcccaggctcaatctggtaccggaaagacctccatgattgctcttactgtttgtcag
ctcgtcgatacatccactagagaggtccaggcattgattttgtcaccaacgagggaattg
gccgctcagactgagaaagtgatattggccattggtagttacataaatatacaagctcat
gcttgcattggtggtaaaagtgttggtgaggatatcaggcaactagaatatggagtccat
gtggtatctggaactcctggtagggtctgcgatatgatcaagaggcgaaccctacgtacc
agagccattaaattattagttcttgatgaatctgatgagatgttgagtagagggtttaag
gatcagatttatgatgtgtacagatatctacctccagagcttcaggtttgcttgatttct
gctacccttcctcacgaaatcctggagatgacaagcaagtttatgacagatcctgtgaaa
attcttgttaaacgtgatgagttgacattggagggtatcaagcaattttttgttgcagtt
gaaagagaggagtggaaatttgatactctatgtgatctttatgatacccttacaattaca
caagctgttatcttctgtaacacaaagcggaaggttgattggctcactgaaaagatgcgc
agtaacaactttacagtctcatccatgcatggagacatgcctcaaaaggaacgagatgca
attatgggagagttccgggatggtacaacccgtgttctcattacaacggatgtttgggcc
cgaggcctcgatgttcaacaggtatccttggttatcaattatgaccttccaaacaatcga
gaactgtacattcatcggattggtcgatctggtcgatttggtcgcaagggtgttgcaata
aactttgttaaaagtgacgacatcaagattttaagggacattgagcagtactacagtacc
cagattgatgaaatgccaatgaatgttgctgatctcatataa
DBGET
integrated database retrieval system
