Ziziphus jujuba (Chinese jujube): 125420013
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Entry
125420013 CDS
T04794
Name
(RefSeq) transcription factor WER
KO
K09422
transcription factor MYB, plant
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zju03000
]
125420013
Transcription factors [BR:
zju03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
125420013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
SLIDE
Myb_DNA-bind_7
HTH_Hrp3
Rap1_C
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
125420013
NCBI-ProteinID:
XP_048322518
LinkDB
All DBs
Position
12:complement(join(6307501..6307957,6308567..6308696,6308856..6308973))
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AA seq
234 aa
AA seq
DB search
MEGENQYKKGLWTEEEDKVLLDYIRVHGKGQWNRIPKATGLKRCGKSCRLRWLNYLSPTV
KRGGFSEEEDDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNHWNTHLCKKLGIVKKQPTR
KIAKIPQVIDDDDDENQPARFPIDNSNSKLSPNISTNSSFNKSVGAMEKKAKPLDDGVGK
ASNNYEDHEQVPWMVNKHLCESILFSNDDLMLINNPGFVDFLDAYYLDLTSHCL
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgaaaatcagtacaagaaggggctgtggacggaggaggaggacaaggttttg
ctagattacatacgggtacatggcaaaggccaatggaaccggattcccaaggccacgggt
ttaaagaggtgtgggaaaagctgcaggttgaggtggcttaattatctaagccccactgtc
aaacgtggtggtttttctgaggaagaagatgacctcattatcagactccataatctcctt
ggaaacaggtggtcactgatagcaggtagagtaccgggtagaactgacaaccaagtaaag
aaccattggaacacccatctctgcaagaagctaggaatcgtcaagaaacaaccaacaaga
aaaattgctaaaatcccacaagtaatagatgatgatgatgatgagaaccaaccagcaaga
tttcccattgataattccaattccaagctttctccgaatatttccactaattcttctttt
aataaatccgtgggagctatggagaagaaagcaaagcctttggatgatggagtaggtaaa
gcatcaaataattatgaagatcatgagcaagttccatggatggtgaacaagcatttgtgc
gaatcaatattattttctaatgatgatttgatgttaatcaataaccctggctttgttgat
tttcttgatgcttattatcttgacctaacgtcacattgtctataa
DBGET
integrated database retrieval system
