Ziziphus jujuba (Chinese jujube): 125422015
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Entry
125422015 CDS
T04794
Name
(RefSeq) polygalacturonase QRT2
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju00040
Pentose and glucuronate interconversions
zju01100
Metabolic pathways
Module
zju_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125422015
Enzymes [BR:
zju01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
125422015
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
125422015
NCBI-ProteinID:
XP_060672780
LinkDB
All DBs
Position
4:join(23663843..23664298,23664426..23664560,23664689..23664853,23664940..23664960,23665112..23665319,23665439..23665520,23665649..23665757,23665975..23666091,23666195..23666428)
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AA seq
508 aa
AA seq
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MKNHRKFPDTCYVAIPAEVLQGTLPSKSRALPSTKYLKIVLVLAILVIFLAFSSLSFSCE
KEALEIANNAITIPVLSYDPNIIGGYNNVSIHRNEMKVVHESLLKFQSHITNLYKIISWW
FSSAKRIPSTKTSTLNVHDFGAKGDGITDDSEAFKEAWNRACSSEGQRVVLLVPRSNYMV
KPIKFSGPCKSDHLIMKMKGKIKASQNRTDYKNKAYWIVFQKLQNFRVEGGGLFDGNGRI
WWQDSCKVNKSLPCTGAPNAVNFIRCNNLKVDNLRFRNAQKMHLVFKKCVNVKVLNLKIS
TPEDSPNTDGIHVTRTQNLKIANCVIKTGDDCISIVGASKNVGATDITCGPGHGISIGSL
GARNSVDYVSYVVVNRATFSGTTNGVRIKTWQGGSGYAKNIRFQNITMQNVRNPIIIDQH
YCDQREPCLEQDSAVQISNVVYSNIKGTSNSEVALRFHCSNSFPCQGIFLQDVDLQPHER
VHDPHKRVVASCSNVMLTKTIRISPNCS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaccacagaaaattccctgatacttgttatgtagccattccagctgaggttctt
caaggtactttgccatcaaaaagtcgtgcacttccaagtacgaagtacctgaaaatcgtt
cttgtcctagcaattcttgtaatattcttagctttttcttccttgtctttcagttgtgaa
aaagaggcactagaaattgccaataatgccattactattccagtacttagctatgacccc
aacattattggtggctataataatgtttctattcatagaaatgagatgaaggtcgtccat
gaaagcttgcttaaatttcagtcccatatcactaatctttacaagatcatttcatggtgg
ttttcttcagcaaaaagaattccttcaacaaagactagcacattaaatgtccatgatttt
ggagctaaaggtgatggaataacagatgatagtgaggcattcaaggaagcttggaataga
gcttgttcctccgaaggtcaacgtgtagttctcttggttcctaggagcaattatatggta
aagccaataaaattttcaggcccttgcaaatctgatcatctcataatgaagatgaaaggg
aaaatcaaagcttctcaaaaccgaacagattacaaaaataaagcatactggattgtgttt
caaaagcttcaaaacttcagagtagaaggtggtggcctttttgacggcaatggaaggata
tggtggcaagactcttgtaaagttaacaaatctcttccttgcacaggcgcaccaaatgct
gtgaatttcattagatgcaacaatctgaaagtagataatctgaggttcaggaatgcacaa
aaaatgcatctggtatttaaaaagtgtgtgaatgttaaagttttgaatctcaagataagt
acaccagaagatagccccaacaccgatggaattcatgtcacaagaacacaaaacctcaag
atagccaactgtgtcatcaagacaggtgatgactgcatttccattgtaggtgcgtcaaaa
aatgttggagctacagatataacatgtggaccaggtcatggaattagcattggaagcttg
ggagccagaaattcagttgattatgtctcctatgtggttgtgaatagagcaacattttca
ggaaccaccaatggagtaagaatcaagacttggcagggagggtccggatatgcaaaaaac
attaggtttcaaaacattacaatgcagaatgtgagaaatccaataatcatagatcaacat
tattgtgatcaaagagaaccatgcttagaacaggactcagctgtgcagattagcaatgta
gtgtacagtaacatcaaaggaactagtaattcagaagtggcattgagatttcactgcagc
aacagctttccatgtcaaggtattttcttgcaagatgtggatttacaacctcatgaaaga
gttcatgatccccataaaagagttgttgcttcatgtagcaatgttatgttgactaaaacc
ataaggatatcaccaaattgttcttga
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