Ziziphus jujuba (Chinese jujube): 125422115
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Entry
125422115 CDS
T04794
Name
(RefSeq) alpha-copaene synthase-like
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
125422115
Enzymes [BR:
zju01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
125422115
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Gene cluster
GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_synth
Terpene_syn_C_2
FlaC_arch
ANTAR
DUF7337
Motif
Other DBs
NCBI-GeneID:
125422115
NCBI-ProteinID:
XP_060672679
LinkDB
All DBs
Position
4:join(4999162..4999272,5000371..5000653,5001012..5001384,5001626..5001847,5002024..5002162,5002388..5002639,5003189..5003467,5016957..5017136)
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AA seq
612 aa
AA seq
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MSIQVSAVPEALTQSKNRPSADFHPSIWGDYFLSLSVQKEHIEKMKQQVEELKEEVKGLI
MKCSHKKPLQKLELIDAIQRLGVSYHFEREINEALEKIYNSYGFLVEEDDDLYTISLWFR
LLRQHGYYISCDVFNKFKYGDGEFKASLTADVPAMLSLYEAAHLCMHGEEILDGALVFTT
THLQSELSNMNPDLAASVIFALNRSIRKNIPRSETRHYISFYPKEKSHNKTLLKLAQLDF
NVLQALHQKEVANLSSRWWKNLDFRRKLPYARDRLVELYSWIYAMFFEPKYSLARVLVTK
VVAMASIIDDTFDAYGTYEEIKLFTESIIRWDISAKDVLPDYMKLIYQEIVDNYSQFDEH
TNKEGRSYGSAYAKQAMKELVQAYFAEVGWFHSKCTPGVEEYISNGEVSATYYALITASF
LFMGEEIATEEAFIWASNKPKIIKAASLIGRLMNDITSHKFERKREHCASAVECCMEQHG
VEAEEAYKMLHQEIENAWKDINQELMKPTAVATPVLDCVLNLARMSDVSYKDGDSYTNPH
LIKDTISLLLVDPITTFLAVYIFTDTQNDEDYCTAGSKAEQKKAEKIAFDVNLEKFDTAA
KIKVIKEGPLPI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatccaagtttcagcagttcctgaagccttaacccaaagtaaaaaccgtccttcg
gcagattttcatcccagcatctggggtgattatttcctctctctctcggtgcaaaaggag
cacatcgaaaaaatgaagcaacaagtcgaagaattgaaggaagaagttaaagggttgata
atgaaatgttctcacaaaaaacctttgcaaaagttggagttgattgatgcaatccaacgt
ttaggtgtgtcgtaccattttgagagggagattaacgaagcattagaaaagatctataac
tcttatggatttcttgttgaagaggatgatgacctttacactatttcactttggtttcgt
ttgcttaggcaacatggttattatatttcatgcgatgtatttaacaagttcaagtacgga
gatggtgagtttaaggcatccttaactgctgatgttcctgccatgctaagtctatatgag
gcagcacacctttgcatgcatggggaagaaattcttgatggagccctagttttcaccacc
actcatcttcagtcagagctaagtaatatgaaccccgacctcgccgcaagtgtcatcttc
gcccttaaccggtccatccgtaaaaacataccgaggtcagagacaagacattacatctct
ttctaccctaaagaaaagtcccacaacaaaactttgttaaagttggcacagttggatttt
aatgttttacaagcattgcatcaaaaggaagtagctaacctatcaagtaggtggtggaaa
aacttggactttcgaaggaagttgccttatgcaagagacagactagtagaattatactct
tggatttatgcaatgttttttgaacccaaatattcccttgcaagagtgttagttaccaaa
gtagtagccatggcatccatcatagatgatacctttgatgcttatggaacatatgaagaa
atcaaactcttcacggaatcaatcataaggtgggatattagtgccaaagatgttcttcca
gattacatgaaattgatatatcaggaaattgtggataattatagtcaatttgacgagcat
actaacaaggaaggaagatcttatggttcagcttatgcaaaacaagcaatgaaagaatta
gtccaagcctattttgctgaagttggttggtttcatagtaagtgcactccaggggtggag
gaatacatatccaatggggaagtaagtgctacttattatgctctcataacggcctcgttt
ctattcatgggtgaggagattgcaactgaagaagctttcatttgggcctctaataaacca
aaaatcattaaagctgcttcacttattggtagactaatgaacgacattacctcccataag
ttcgagcgaaagagagaacattgtgcatcggcagttgaatgttgcatggagcaacatgga
gttgaagcagaagaagcatataaaatgttgcaccaagaaattgaaaatgcttggaaagat
ataaaccaggaattaatgaagccaactgctgtagcaacccctgttcttgactgcgttttg
aatcttgcacgcatgtcagatgtttcgtacaaggacggtgacagctataccaatcctcat
ttgatcaaagacaccatttctttgctgcttgtcgatcctataacaacgtttttagcagtc
tatatcttcactgatacacaaaacgatgaggattattgcactgctggttcaaaggctgaa
caaaagaaggcagagaagatagcttttgatgtgaatttggagaagtttgacactgctgca
aaaatcaaggtgattaaagaagggcctttaccaatctag
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