KEGG   Ziziphus jujuba (Chinese jujube): 125422282
Entry
125422282         CDS       T04794                                 
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B
  KO
K07466  replication factor A1
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03030  DNA replication
zju03420  Nucleotide excision repair
zju03430  Mismatch repair
zju03440  Homologous recombination
zju03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    125422282
   03420 Nucleotide excision repair
    125422282
   03430 Mismatch repair
    125422282
   03440 Homologous recombination
    125422282
   03460 Fanconi anemia pathway
    125422282
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:zju03000]
    125422282
   03032 DNA replication proteins [BR:zju03032]
    125422282
   03400 DNA repair and recombination proteins [BR:zju03400]
    125422282
Transcription factors [BR:zju03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    125422282
DNA replication proteins [BR:zju03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    125422282
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     125422282
   MMR (mismatch excision repair)
     125422282
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     125422282
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 Rep-A_N tRNA_anti-codon DUF223 Rhabdo_glycop_CD
Other DBs
NCBI-GeneID: 125422282
NCBI-ProteinID: XP_048329039
LinkDB
Position
2:join(20981455..20981585,20982172..20982318,20982444..20982662,20982766..20982943,20983065..20983335,20983417..20983519,20983604..20983728,20983851..20983929,20984023..20984167,20984310..20984470,20984559..20984679,20984778..20984975)
AA seq 625 aa
MAMSGPTPDAVSTILENPSPDTSTGMPEIVVQVLDLTAKGNRYMFTASDGKKKLKGILPS
HLTTEVISGNIQNLGLIRILDYSLNDIPSKSEKYVIVTKCEAVSPALEKEIKSEIKSEET
GISLKPRQENEIKSEVKMEEAGIILKPKQEIIAKSAAQIVHEQHGNMAPAARMAMTRRVH
PLVSLNPYQGSWTIKVRVTNKGTMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK
FYERFQLGKVYYISKGTLKVANKQFKTVQNDYEMTLNENSEVEEASNEVSFVPQTKFNFV
PIDLMGPYVNGRELVDVVGVVQSVSPTMSIRRKSNNESIPKRDIIIADETKKTVVVSLWN
DLATTVGQELLDIADQSPIVAIKSLKVGDFQGVSLSTLSRSTVLVNPDIPEAKKLRTWYD
SEGKGASMASIGAGVSSATKTGARSMYSDRVFLSHITENHSMGEDKPVFFSVRAYISFIK
HDQTMWYRACKTCNKKVTEAIDSGYWCEGCQKNDEECSLRYILGARVTDASGEAYISAFN
NEAESIIGCSADELDKLKTQEGEDNLYLQKLKQATWVPHLFRISVSQSEYNNEKRQRITV
RAVAPVDFAAESRFLLEEISKMRSS
NT seq 1878 nt   +upstreamnt  +downstreamnt
atggcgatgtcaggacctacaccagatgccgtttcaaccatacttgaaaacccatcaccg
gatacttccaccggaatgccagagatcgtcgttcaagttctcgatctcacagctaagggt
aaccgatacatgtttactgctagtgatgggaaaaaaaagttaaaaggaatcctcccatcg
catctgactaccgaggtcatctcaggaaacattcagaatctgggtcttattagaatcctt
gattattctctcaatgacattccaagcaagtccgaaaaatatgtaattgtaacaaagtgc
gaggcggtttctcctgcactagaaaaggaaatcaaaagtgagattaaaagtgaggaaact
ggcattagtttgaaaccaaggcaagaaaatgagatcaagagtgaggtgaaaatggaagaa
gctggcattatcttgaagccaaagcaagaaattattgcaaaatcagctgctcagatagtc
catgagcagcacggaaatatggcccctgctgctcggatggccatgacacgcagagttcat
cctcttgtttccttgaacccttaccaaggcagttggaccataaaggtccgtgttacgaat
aagggaaccatgcgcacatataaaaatgctagaggtgaaggctgtgtctttaatgtggag
ttaacagatgaagatggaacccaaattcaagcaacaatgtttaatgaggcagcaaggaag
ttctatgaaaggtttcaactagggaaggtttactacatttcaaagggaactctaaaagtt
gctaacaagcagtttaaaacagtgcaaaatgattatgaaatgacattgaatgagaattct
gaagtggaagaggccagcaatgaagtatcttttgttcctcaaactaaatttaattttgtt
ccaattgacctgatgggtccttatgtaaatgggagggagcttgtggatgttgttggtgtt
gttcagagcgtatctcctaccatgagcatcagaaggaagagcaacaatgagagtattcca
aaacgtgacataataattgctgatgagacgaagaagacagttgtagtttctttgtggaat
gatcttgcaactactgtaggccaggaattgcttgatattgctgaccaatcacccatcgtt
gctattaagtccctcaaggttggggactttcaaggtgtgtctttgtcaacactgagcagg
agcacagtattggtaaatccagatatacctgaagcaaagaagttgagaacttggtatgat
tctgaaggtaaaggcgcctcaatggcctctattggcgctggtgtgagttcagcaaccaag
actggtgcaagatccatgtactctgacagagtcttcctttctcatataaccgagaaccat
tcaatgggcgaggataagcctgtgtttttcagcgtgagagcatatataagttttatcaaa
catgatcagacaatgtggtatcgagcttgcaaaacttgcaacaagaaagtgacagaggct
atcgattctggttattggtgtgaagggtgccaaaaaaatgatgaagagtgtagtttaaga
tatatattgggagcacgcgttactgatgcaagtggtgaagcttatatctctgcatttaat
aatgaagcagagagtataattgggtgctctgctgatgaacttgataaattgaaaactcag
gagggagaggataatctatacctgcaaaaattgaagcaagctacttgggttcctcatctg
ttcaggatcagtgtttctcagagtgagtacaacaatgaaaagagacaaaggataacagtc
agggccgtggcccccgttgattttgctgcagaatcaagatttttgctagaagaaatatca
aagatgagatcttcctga

DBGET integrated database retrieval system