KEGG   Ziziphus jujuba (Chinese jujube): 125423547
Entry
125423547         CDS       T04794                                 
Name
(RefSeq) uncharacterized protein LOC125423547
  KO
K12828  splicing factor 3B subunit 1
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125423547
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zju03041]
    125423547
   03036 Chromosome and associated proteins [BR:zju03036]
    125423547
Spliceosome [BR:zju03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    125423547
 Complex B
    125423547
 Complex C
   U2 SnRNP specific factors
    125423547
Chromosome and associated proteins [BR:zju03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    125423547
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 Adaptin_N Cnd1 XMAP215_CLASP_TOG
Other DBs
NCBI-GeneID: 125423547
NCBI-ProteinID: XP_048334089
LinkDB
Position
3:complement(21737661..21741038)
AA seq 1125 aa
MAHKMASYMAPKWLLKEVPRGSEELDVGVSRKQFHGGEGEYQRRRLRQRVFSPERNDPFA
LGDKTPDPSMRTYADVMMEAEEEALKRQQRRWDQSQEDEGRQEKKAKTCDWDLPDATPSS
TSSSSHAKRRNIWDETPTPKRQRSSRWDETPSATIMGSSTPVAAAAYTPGVTTPQGGVEL
ATPMPGAINLSEHHNFNLLMRWERDIEDRNRPLTDEDLDAMLPTGDEGYKILDPPVSYVP
IRTPARKLLATPTPMATPLYYIPEENRGQQFDVPKEPPAGLPFMKPEDYQYFGSLLLNEQ
DEQELSPEKQKERKIMKLLLKIKNGTPPQRKTALRQLTHKARDEFGAGPLFNRILPLLMQ
PTLEDQEKHLLVKVIDRVLYKLDELVRPYVHNILVVIEPLLIDEDYFARVEGREIISNLS
KAAGLATMIAAMRPDIDHVDEYVRNTTARAFAVMASALGIPSLLPFLKAVCQSKKSWQAR
HTGIKIVQQIAILTGCSVLPNLKSLVEIIQHGLNDENQKVQTITALSLASLAEAASPYGI
ESFDSVLKPMWKGIRSHRGKVLAAFLKAIGCIIPLMDAVYASYYTKEVMVVLIREFQSPD
QEMKKIVLKVVKQCVSTEGVEPDYIRNNILPEFFRNFWVRRMALDRRNYKQLVETTVEMA
NRVGVADIVSRIVEDLKDESEPYRQMVMETIGQSVINLGASDIDSRLEELLIDGILYAFQ
EKSCDDEAINVMLNGFGAVVNSLGQRVKPYIPQICGTIKWRLNNKSAKVRQQAADLIPRI
AVVMKQCQEEQLIGHLGVVLYEYLGEEYPQVLGSILGALNAIVGCIGMTKMTPPVKDLLP
RLTPILKNRHEKVQEKCIDLIGRIADRGAEFVPAREWMRICFELLELLKAHKKGIRRASV
STFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAEICLPFAVLPYLMNEYRV
PELNVQNGVLKSLSFLFEYIGEMGKHYIYAATPLLEDALMEKDLVHRQTAACVVKHMALG
VVGLGCEDALVHLMNYVWPNIFETSPHVVNAVMEAIEGMRVALGAAVVLNYCLQGLFHPA
RKVREVYWKVYNALYIGAQDSLVASYPWLEVEHNKVPSRPELLMF
NT seq 3378 nt   +upstreamnt  +downstreamnt
atggcgcacaagatggcgtcttatatggcccctaaatggctgttgaaagaggtgccaaga
ggcagcgaagaattagatgtgggggtgtcaaggaaacagtttcatggcggcgagggtgag
tatcagaggcggaggctgcgacaacgtgtgttttctccggagaggaacgatccgtttgca
ttgggagacaagaccccggacccttccatgagaacctatgctgatgtgatgatggaggcg
gaagaagaggcgctgaagaggcaacagaggaggtgggaccaatctcaggaagatgaagga
cggcaggagaagaaagccaagacttgtgactgggatttgcctgatgcaaccccatcatca
acatcatcatcatctcatgcaaagaggaggaacatatgggatgagactcccacccccaaa
aggcagaggtcgtctcggtgggatgagaccccgtctgcaactattatgggtagttcaact
ccagtggcagcagcagcttatacacctggagtgaccacccctcaaggaggagttgagctt
gctacaccaatgccaggcgctattaatctttcagagcaccataattttaatttactgatg
aggtgggagagagatattgaggacagaaaccgccccttgactgacgaagatcttgatgca
atgcttcctactggagatgaggggtataagatcttggaccctccggtttcttatgtccct
attcgaacaccagctaggaaactgcttgccacccctactcccatggccactccactctat
tacatccccgaagaaaatcgcgggcagcagtttgatgttccgaaggaaccacctgctggc
ttgcctttcatgaagccagaggactaccaatactttggttcattgttgttgaatgagcaa
gatgaacaggaattgtcccctgaaaagcagaaagaacgtaagatcatgaagcttttgctt
aagatcaagaatggtacacctccacagagaaagacagccttgagacagcttactcataaa
gctcgagacgagtttggtgctggaccattgttcaaccgtattctaccattgcttatgcaa
cccactttggaagatcaggagaagcatctcttggttaaggtcatagatagagtgctttac
aaattggatgaattggtgcgtccttatgtccacaatatactcgttgtgattgagcctttg
ttgattgatgaagactactttgcccgtgtggaaggcagagagatcatttcaaatcttagt
aaagcagccggtttggctaccatgattgctgcaatgcggccggatatcgatcacgttgat
gaatatgttaggaacactaccgcaagagctttcgctgtcatggcctctgctctcggtatc
ccttcactcttgccgttcttgaaagctgtctgtcagagtaagaaatcttggcaagcaagg
cacactggaatcaagattgttcagcagattgcaattttaaccggctgttctgttcttccc
aacttaaagtctctagtggaaatcatacagcatggactgaacgacgagaatcagaaggtg
cagacgattactgcattatctcttgcttcacttgccgaggctgcttctccatatggtatt
gaaagtttcgactcggttttgaaaccaatgtggaagggtattagatcacaccgcggtaag
gtcttggctgcattcttgaaagccattggttgtattattcctctaatggatgctgtatat
gctagttactataccaaggaagtgatggttgtattaatccgagagttccagtcacctgat
caagagatgaagaaaattgtgctgaaagtggtaaagcaatgcgtgagtacagagggtgta
gagcccgactatataagaaataatattcttcctgaattcttcagaaacttctgggttaga
cggatggcattggatagaaggaactataagcagctagtggagacaactgtggagatggca
aacagagtaggtgttgccgatatagtatcaagaattgttgaggatctcaaagatgagagc
gaaccttacaggcaaatggtaatggaaactattggacaatcggttataaacttgggtgcc
tcagatattgattctcgcttggaggaacttctgattgatggaattctttatgctttccaa
gagaagagctgtgatgatgaagctatcaacgtcatgctcaatgggtttggtgcggttgtg
aattctctcgggcagagagtaaagccatacatacctcagatatgtggtactatcaagtgg
cggttgaataacaagagtgctaaggtgaggcaacaagcagctgatcttattccaagaatt
gctgttgtcatgaagcagtgccaagaggaacaactgataggccatcttggtgttgtgctg
tatgagtatctgggggaagaatacccacaagttttgggatcaattttgggtgcgctcaat
gcaattgtcggttgcattggtatgacgaagatgacaccccctgtaaaggacttgcttccc
agattgactccaattttgaaaaataggcatgagaaagtacaggagaagtgtattgatctt
ataggtaggattgcagatcgcggtgctgagtttgttccagctagggagtggatgaggatc
tgttttgagcttctcgagttgctcaaggcccataagaagggcatcaggagagcttctgta
agcacatttggttacattgccaaagccattgggccacaagatgtcctggcaaccctatta
aacaatcttaaggtgcaggagagacagaaccgtgtttgcacgaccgtggcaatcgcaata
gtagccgaaatctgtttgcctttcgctgttctaccatatctgatgaacgagtacagagtt
ccagagctcaacgtgcagaacggagtgctgaaatctctctcttttctgttcgagtacatt
ggagaaatgggaaaacactatatttatgcagcgaccccattgctcgaggacgctctgatg
gagaaagatttggttcacagacaaacagcggcttgtgtggtcaagcacatggctttgggg
gtggttggattgggttgtgaggatgcattagtacacttgatgaactacgtgtggcccaac
atattcgagacttcgccgcatgtggtaaatgctgtcatggaagccattgaagggatgaga
gtggctttgggtgctgctgttgttctaaactactgtctccaagggttgttccatccggcc
aggaaagttcgagaagtttactggaaggtctataacgcgctgtatatcggagcccaagat
tcacttgtagcttcttatccatggctggaggttgagcacaacaaagtgcccagtaggcct
gagttgcttatgttttag

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