Ziziphus jujuba (Chinese jujube): 125423618
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Entry
125423618 CDS
T04794
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju00040
Pentose and glucuronate interconversions
zju01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125423618
Enzymes [BR:
zju01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125423618
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
125423618
NCBI-ProteinID:
XP_048334266
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Position
3:join(17213549..17213655,17214153..17214212,17214956..17215030,17216173..17216815,17216915..17217018,17217322..17217460,17217553..17217774)
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AA seq
449 aa
AA seq
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MADSRRCVWTFMVVLVMFCFVGALARVRLDEISLTREEGGETGQLQSSRNSSMADRLAHF
AEGLNDNAVQDPEEVVSLVEMSIRNSTERRKLGFFSCGTGNPIDDCWRCDPDWQKNRKRL
ADCGIGFGRNAIGGRDGRFYVVTDPGDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQL
KQELIMNSFKTIDGRGVNVHIANGACITIQFVTNIIIHGLHIHDCKPTGNAMVRSSPSHF
GWRTMADGDAISIFGSSHIWVDHNSLSNCADGLVDAVLGSTAITISNNHFTHHNEVILLG
HSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTIN
SQGNRYSAPTNPFAKEVTKRVETAASQWKSWNWRSEGDLLLNGAYFTPSGAGASASYARA
SSLGAKSSAMVGTMTSGAGVLGCRRGHQC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctcggagatgtgtttggactttcatggtggttctcgtcatgttctgcttc
gtgggcgcacttgccagagtacggttggacgagatctctctaaccagggaggaaggtgga
gaaactgggcagttgcagagctcaaggaactcatcaatggcggacaggctcgcacatttc
gctgaggggctgaacgacaatgcagttcaagacccagaagaagtcgtctccttggttgag
atgagcatccgcaacagcactgaaaggagaaagcttggttttttctcatgtggaactggc
aatcccattgatgattgctggcgctgcgatcccgactggcagaaaaaccgcaagcgtctt
gcagactgtggcattggttttggtagaaatgccatcggtggtcgtgatggtcgattctat
gttgtcaccgaccccggtgatgatgaccctgttaacccaaaacctggtactctgcgtcat
gctgtcatccaggacaagcctctgtggattgtgttcaagagggacatggtgatacagttg
aagcaggagcttatcatgaacagcttcaaaacaattgatggtcgtggggtcaatgtccac
attgctaatggagcttgcatcacaattcagttcgtgactaatatcattatacacggtctt
cacatccatgactgcaagcccactggtaatgccatggtgaggagctcaccatctcatttt
ggatggagaacgatggctgatggtgatgccatctccatctttgggtcaagccacatatgg
gttgatcacaactccctctctaactgtgctgatggcctcgttgacgctgtccttggctcg
accgccattaccatttccaacaaccacttcacccaccacaatgaggtgatacttttgggc
catagtgactcttatacaagagacaagcaaatgcaagtcaccattgcgtacaaccatttt
ggagagggactcatccagagaatgccaaggtgtaggcacgggtatttccatgtggtgaac
aatgactacactcactgggaaatgtatgccattggtggaagtgcaaatcctaccattaac
agccagggcaacagatattcggctccaaccaacccctttgcaaaggaggtgacaaaaagg
gtggaaacagctgcaagtcagtggaagagttggaattggaggtcagagggagatctgctg
ctgaatggtgcctacttcactccatctggtgctggtgcatcagcaagttatgcaagggcc
tcaagtttaggagccaagtcctctgctatggtcggtaccatgacttccggtgctggtgta
cttggttgccgcagaggccatcaatgctag
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