Ziziphus jujuba (Chinese jujube): 125423796
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Entry
125423796 CDS
T04794
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1 isoform X1
KO
K14485
transport inhibitor response 1
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
125423796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zju04121
]
125423796
Ubiquitin system [BR:
zju04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125423796
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
F-box-like
F-box
FANCI_S1
Motif
Other DBs
NCBI-GeneID:
125423796
NCBI-ProteinID:
XP_048334977
LinkDB
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Position
1:complement(join(19854743..19855498,19855928..19856420,19858670..19859172))
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AA seq
583 aa
AA seq
DB search
MSSKRKKESPESDGSTRASNFPDEVLERVLGPVKSHKDRSSVSLVCKDWYNAERWSRTHV
FIGNCYSVSPEIVTRRFPNIRSVTLKGKPRFSDFNLVPPNWGADIQNWLVLFATKYPCLE
ELRLKRMTVTDESLEFLALSFPNFKALSLLSCDGFSTDGLAAIATHCKNLVELDIQENDI
DDKSGGWLSCFPETFTSLEILNFANLNSDVNFDFLERLISRCKFLKVLKVNKNITLDQLQ
RLLSRAPQLMELGTGTFSQDLTANQCSELESAFNNCKNLRTLSGLWEATALFLPVLYPAC
SNLTFLNLSYAALQSSELAKLLAHCPNLRRLWVLDTVEDKGLEAVGLNCPLLEELRVFPA
DPFDNEIIHGVTESGFVAVSYGCRRLHYVLYFCRQMTNAAVATVVQNCPDFTHFRLCIMT
PHQPDYLTDEPMDEAFGAVVKTCTKLQRLAVSGLLTDLTFEYIGKYAKNLETLSVAFAGS
SDWGMRCVLDGCPKLRKLEIRDCPFGNAALLSGLGKYESMRSLWMSACKVTMNACRLLAR
QMPRLNVEVMKDEESDDSQADKVYVYRSVSGPRRDAPPFVLTL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgaagagaaagaaggaatctcccgagtcggacgggtcgactcgggcatcgaat
tttccagacgaggtgctagaacgggttctgggtccggtaaagtcgcataaggataggagc
tcagtctctctggtgtgcaaagactggtacaacgccgagaggtggtcccggacccacgtg
ttcatcgggaactgctattcggtgtcgccggagatcgtgacccggcggttcccaaatata
cggagcgtgacgctgaaagggaagcctcggttctcggacttcaatttggtgcctccgaat
tggggagctgatattcagaattggctggtgttgttcgccaccaaatacccatgtcttgaa
gagctgaggctcaagaggatgaccgtcactgatgagagcttggagttcttggccctttcg
tttcccaatttcaaagctctctcgcttttgagctgcgatgggttcagcaccgatgggctt
gcagccattgccactcattgcaagaatttggttgagcttgacatacaggagaatgacatt
gatgacaaaagtggtggttggttaagctgcttcccagagactttcacatccctggaaata
ctaaactttgccaacctgaatagcgatgtcaattttgatttccttgaaagacttataagt
aggtgcaaatttttaaaggttttgaaggttaataaaaacataaccttggatcaattacaa
aggttgcttagtcgtgcccctcaattaatggagcttggaacaggcacattttcacaagat
ctaacagccaaccagtgttcagagcttgaaagtgcattcaacaactgtaaaaacctacgc
accctctctggattatgggaagctacagccctatttctcccagttctatatccagcatgt
tcgaatttaacattcctgaacttgagctatgcggctttgcaaagtagtgaattagccaaa
cttctggctcactgtccaaatcttcggcgtctctgggtccttgacacggtggaggacaag
gggctggaggctgttggccttaactgtcctctgcttgaggaactccgtgttttccccgca
gatccttttgataatgagattatccatggggtgactgaatctggatttgttgctgtctct
tatggttgccggagactccattatgtcctttacttttgccggcagatgactaatgctgct
gtagcaactgttgtgcagaactgccctgatttcacacacttccgtctctgcataatgacc
ccacaccaaccagattacttgacagacgagcctatggatgaggcttttggtgcagtggtg
aagacttgtaccaaactccagaggcttgcagtttcaggattattaactgacttaacattt
gagtatattgggaaatatgccaaaaatttggaaactctttcagtggcttttgctggtagc
agtgattggggaatgcggtgtgttctggatggttgtccaaagttgaggaaacttgagata
agggattgcccattcggaaatgcagctcttctctcgggtttgggaaagtatgaatcaatg
agatcactttggatgtcagcctgcaaagttacaatgaatgcctgtcggttactggcaaga
caaatgccaaggttgaatgttgaggtgatgaaggatgaggaaagcgatgacagccaggct
gataaagtttatgtttaccgttctgtttctggaccaagaagggatgccccaccttttgtt
ctcactctctga
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