Ziziphus jujuba (Chinese jujube): 27963881
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Entry
27963881 CDS
T04794
Symbol
rpoA, A9277_gp036
Name
(RefSeq) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
27963881 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zju03021
]
27963881 (rpoA)
03400 DNA repair and recombination proteins [BR:
zju03400
]
27963881 (rpoA)
Enzymes [BR:
zju01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
27963881 (rpoA)
Transcription machinery [BR:
zju03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
27963881 (rpoA)
DNA repair and recombination proteins [BR:
zju03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
27963881 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
RNA_pol_L_2
SAM_2
Motif
Other DBs
NCBI-GeneID:
27963881
NCBI-ProteinID:
YP_009256359
UniProt:
A0A172QDH9
LinkDB
All DBs
Position
CP:complement(82631..83626)
Genome browser
AA seq
331 aa
AA seq
DB search
MVHEKVTVSTQTLQWKCVESRVDSKRLYYGRFILAPLMKGQADTIGIAMRRVLLGEIEGT
CITRAKFDKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPRYVTAQD
IILPPSVEIVDNTQPIANLTEPINLCIELQLERHRGYRIKTPNNFQDGSYPIDAVFMPVR
NANHSIHSYANGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENFHLE
KNQHKVTLPPFTFHDRLAKPRKNQNEIVLKSIFIDQLELHPRVYNCLKRSNIHTLLDLLN
NSEEDLMKMKHFRIEDIKHILDILEIEKHFA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggttcacgagaaggtaacagtatctactcagacactgcagtggaagtgtgttgaatca
cgagtagacagtaagcgtctttattatggacgctttattctggctccacttatgaaaggc
caagccgatacaataggcattgcgatgcgaagagttttgcttggagaaatagaaggaaca
tgtatcacacgcgcaaaatttgataaaataccacatgaatattctaccatagtgggtatt
caagaatctgtacatgaaattttaatgaatttgaaagaaattgtattgagaagtaatctt
tatggaactcgtgatgcgtctatttgtgtcaaaggtccccgatatgtaactgctcaagac
atcatcttaccaccttcggtagaaatcgttgataatacacagcctatagcgaacctaacg
gaaccaattaatttgtgtattgaattacaactcgaaaggcatcgcgggtatcgtataaaa
acgccaaataactttcaagacggaagttatcctatagatgctgtattcatgcctgttcga
aatgccaatcatagtattcattcttatgcgaatgggaatgaaaaacaagagatacttttt
ctcgaaatatggacaaatggaagtttaactcctaaagaagcacttcatgaggcttcccgg
aatttgattgatttatttattccctttttacatgcagaagaagaaaatttccatttagaa
aaaaaccaacacaaagttactttacccccttttacttttcatgatagattggctaaacca
cgtaaaaatcaaaacgaaatagtattgaaatctatttttattgaccaattagaattgcac
cccagggtctataattgccttaaaaggtcgaatatacatacattattagaccttttgaat
aacagtgaagaagaccttatgaaaatgaaacattttcgcatagaagatataaaacatata
ttggacattctagaaatagaaaagcatttcgcataa
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