Zobellia laminariae: Q5W13_12935
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Entry
Q5W13_12935 CDS
T09239
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
zla
Zobellia laminariae
Pathway
zla03030
DNA replication
zla03430
Mismatch repair
zla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q5W13_12935
03430 Mismatch repair
Q5W13_12935
03440 Homologous recombination
Q5W13_12935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zla03032
]
Q5W13_12935
03400 DNA repair and recombination proteins [BR:
zla03400
]
Q5W13_12935
Enzymes [BR:
zla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q5W13_12935
DNA replication proteins [BR:
zla03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q5W13_12935
DNA repair and recombination proteins [BR:
zla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q5W13_12935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
DNA_pol_A_exo1
DUF7508
Rv2179c-like
PipA
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
WKX74713
LinkDB
All DBs
Position
complement(2698841..2700187)
Genome browser
AA seq
448 aa
AA seq
DB search
MYSIVDIETTGNGIKGNKITEISIFIYDGYEIVDEFTSLVNPECEIPYFITGLTGIDNDM
VRDAPKLEEIVEDILKITENTIFVAHSVNFDYNVIKNELQLLGIDFIRKKLCTVRLSRKL
LPYYHSYSLGKLCSSLGIPLTDRHRARGDAHATTLLFKKLLRADGADEVFKSFLNSRSQE
ATLPSSLPREAFEKLPTAPAVYYFKDGKGKIIYVGKAINIKKRVLSHFYDKKTKEIQLCQ
VTADIDFELSGSELLALLMESNAIKHHYPEFNRAQKRKIQPYGIFSYEDRNGIMHLAFNK
LKMAPNSVLTLYSPTDCRLFIEEVCKSFRLCPKYCHLQENVKTCSHYRIETCDGICREEE
DLALYNEKVQLALKHIRAQKEDFVIREKGRNAEEQSFVLVKNSAYVGYGFIDQENTITAD
HDLETFLVPQNNTLETESIIKSYMSKNP
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ttgtatagcatagtagacatagaaactaccggcaacggtattaagggtaataaaattacc
gaaatttccatattcatatatgacggttatgagattgtggacgagttcacttctcttgta
aatcccgagtgtgaaataccttatttcattaccggattaactggaattgataatgatatg
gtccgtgacgctcccaaactggaggaaattgtagaggacattctcaaaattacggagaac
accatttttgtagcccacagtgtaaactttgattacaacgtaattaagaacgaattgcag
cttttgggtattgattttattcgtaaaaagctttgtacggtccgcttatcgcgtaagttg
ttaccttactaccattcctatagtttaggaaagttatgctcttcattaggcataccgtta
acggacaggcaccgcgctagaggcgatgcgcatgctaccaccctactctttaaaaaatta
ttacgcgcagatggtgccgacgaggtctttaagtccttcttaaactcccgttcccaagaa
gctaccttaccttcttctttgcctagggaggcttttgaaaagttgcccacagctcctgct
gtttattattttaaggatggaaaaggaaaaatcatctatgtagggaaggccattaatatc
aagaagcgggtactaagtcatttttacgataagaaaactaaagaaatacagctttgccaa
gtaacggcagatatagactttgaactttccggaagcgaacttttggctttgttaatggaa
tccaatgccataaaacatcattacccggaatttaaccgtgcgcagaaaagaaagattcag
ccgtatggaatatttagttatgaagaccgtaacggtattatgcacttagcttttaataag
ttaaaaatggctccaaattctgtactgactttgtatagccctacggattgtagattattt
attgaagaggtctgcaaaagctttaggctgtgcccaaagtattgccatttacaagagaat
gtaaaaacctgttcccattaccgcatagaaacttgtgatggtatctgcagggaagaagag
gaccttgctttatataacgaaaaagtacaactggctttaaagcatattagggctcagaaa
gaagactttgtaattagagagaaaggtagaaatgccgaagagcaatcttttgtattggta
aaaaatagcgcttatgttggttatggctttatagaccaagaaaacactattactgcagac
catgatttggaaacttttctggtgccacaaaataacactttggagaccgaaagtatcatt
aaatcctacatgagcaaaaatccataa
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