Zobellia laminariae: Q5W13_18285
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Entry
Q5W13_18285 CDS
T09239
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
zla
Zobellia laminariae
Pathway
zla03030
DNA replication
zla03430
Mismatch repair
zla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q5W13_18285
03430 Mismatch repair
Q5W13_18285
03440 Homologous recombination
Q5W13_18285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zla03032
]
Q5W13_18285
03400 DNA repair and recombination proteins [BR:
zla03400
]
Q5W13_18285
Enzymes [BR:
zla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q5W13_18285
DNA replication proteins [BR:
zla03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q5W13_18285
DNA repair and recombination proteins [BR:
zla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q5W13_18285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
SL4P
DUF7508
Motif
Other DBs
NCBI-ProteinID:
WKX75571
LinkDB
All DBs
Position
3813221..3814603
Genome browser
AA seq
460 aa
AA seq
DB search
MSQQSYAIVAVNTVAVTEHFHRLIEISVIRITNQMEVERFTSLLNPQMHIGAELTEVTGL
DDDMVRFEPVFREIAEEILRLLEGAVLVSFSDLAYRVLRSEFKKIGYKFVNPTLYISKLV
NERFPEESMDLRGLSEHFGIPVNDLNRCDGMATWTAAWLDKLGLNSNQNENHAVEYYDRR
MLYQQREMDLNSLERKPGVYYFKDSNDAIIYVGKAVRLRDRVKSHFNSKLEREYALCEET
ADIDFVYTGSNLIAELLESDEIKLHHPKYNIAQKKPTAPFIIASKENKKGYLQLSIIRKD
YPDSVNEVYYNRNSVAEKLMEVCKEYNLCPKFSGFHRIQGKCNHEKISNCPSACMGEEDP
ELYNARVKTALKFLESNLNNFAIKLKGRKEGEMGFVLVRDGVYAGFGFVGMNDQIASPED
FENYLVHKTHSYHTTRIIDTFIRKPQNKSKIIYLDSDVLV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagcagtcctatgccatcgttgccgtaaatacggtagcagttacagaacatttt
catcgacttatcgaaatttctgttatacggattactaaccaaatggaagtggagcggttt
acaagcttactaaatccacaaatgcatattggtgctgaattaaccgaggttactggtttg
gatgatgatatggttaggtttgagcctgtttttcgtgaaatagcagaagaaatattgcgt
cttcttgaaggggctgttttggtctctttttcggatttggcttatagggttctaagaagc
gagtttaagaaaattggatataagtttgtaaaccccaccttatatatttctaaacttgta
aatgagcgctttcccgaagaatcaatggatttaagggggctatccgaacattttggtatt
ccagtcaatgacttaaaccgttgtgacggtatggccacatggacagcagcatggttagat
aaattgggtttaaatagcaatcaaaatgaaaatcatgcggtagaatattatgatagaaga
atgctgtaccaacagcgagaaatggatcttaattctttagaacgaaaaccaggggtatat
tactttaaggatagtaatgacgcaatcatttacgtgggtaaggcggtaagattaagagat
agggttaaaagtcattttaacagcaaattggaacgggagtatgctctttgcgaagaaacg
gcggatatcgattttgtttacacaggcagtaatctaatagcagaactactagaatctgat
gagataaagctacatcaccctaaatataatattgcccaaaagaaacctactgcgcctttc
attattgcttctaaggaaaataaaaaaggttatctgcagctttctattattcgcaaagat
tatccggattctgttaacgaggtatattataatagaaattctgttgcagaaaaactcatg
gaggtttgcaaggaatataacctttgcccaaaattttctggattccatagaattcagggt
aaatgcaaccatgaaaagatatcaaattgcccgtctgcttgcatgggagaggaggaccct
gaactttataatgctagagtaaaaacagcattgaaatttctagaatccaatcttaataat
ttcgcaattaagttgaaaggaagaaaagaaggggaaatgggttttgtactagtccgtgac
ggcgtttacgccggattcggttttgtaggaatgaacgatcagatagcctctccagaagat
tttgaaaattaccttgtccataaaacccactcttatcataccactcgtataattgatacg
ttcatcaggaagccacaaaacaagtcaaaaattatttatctagatagtgatgtattggtt
taa
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