Zobellia laminariae: Q5W13_18720
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Entry
Q5W13_18720 CDS
T09239
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
zla
Zobellia laminariae
Pathway
zla02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
zla00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Q5W13_18720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zla03021
]
Q5W13_18720
Transcription machinery [BR:
zla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Q5W13_18720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
HTH_11
UPF0122
SH2_2
HTH_24
Sigma70_ECF
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
WKX75649
LinkDB
All DBs
Position
3903207..3903770
Genome browser
AA seq
187 aa
AA seq
DB search
MITEDIRLLEGMKEDDNSSFKAVYEKYSKVLFIYAHNIIKDKVICEDIIQEVFISLWAKR
KTSNISSLKPYLFQAVKFQIFNHFRNNKFSTEDLTRLNIIDVSMNVSDQLEYSELNQIIR
DQVAKLPKRCRHIFVLSRYDHKSNKEIAEELEISVQAVKNQISKALAFLRNNLQLEEAVI
ISLILLH
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgataactgaagacataaggctcttagaaggcatgaaggaagacgataattcttctttc
aaggctgtttatgagaaatactctaaagttctgtttatatacgctcacaacattataaag
gacaaggtaatttgtgaagatattattcaggaggtttttatatcgctttgggcaaaaaga
aaaacgagtaacatatcttctctaaaaccgtatctctttcaagctgtaaaatttcaaata
ttcaatcatttcagaaataacaaattttcaactgaagatttgaccagattgaatattata
gacgtttcaatgaacgtctcagatcaactagaatattctgagcttaatcaaatcattcgg
gatcaagtagcaaaattgcctaaaagatgtcgtcatatttttgtgttgagcaggtatgac
cataaatcgaataaggaaatagcggaagaacttgagatatccgtacaggcggtaaaaaat
caaatttcaaaagcattggcatttctacgaaacaatcttcaattagaagaagctgtaatt
atttctcttatccttcttcattag
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