Zobellia laminariae: Q5W13_19435
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Entry
Q5W13_19435 CDS
T09239
Name
(GenBank) 3'-5' exonuclease
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
zla
Zobellia laminariae
Pathway
zla03420
Nucleotide excision repair
zla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Q5W13_19435
03430 Mismatch repair
Q5W13_19435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zla03400
]
Q5W13_19435
Enzymes [BR:
zla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Q5W13_19435
DNA repair and recombination proteins [BR:
zla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Q5W13_19435
MMR (mismatch excision repair)
Other MMR factors
Q5W13_19435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WKX75758
LinkDB
All DBs
Position
4047850..4050180
Genome browser
AA seq
776 aa
AA seq
DB search
MKNFIDELNDAQRAPVLHKDGPLMVIAGAGSGKTRVLTYRIAYLMQQGVDPFNILALTFT
NKAAREMKERIAKIAGRSETKNLWMGTFHSVFAKLLRFDGDKLGFPSNFTIYDTQDSQRL
LASIIKEMGLDKDIYKYKQVQNRISSFKNSLITVKAYLKDPDLVEADAMAKKPRMGEIYQ
NYVDRCFKAGAMDFDDLLLRTNELLNRFPEVLAKYQDRFRYILVDEYQDTNHSQYLIVKA
LADRFHNICVVGDDAQSIYSFRGANISNILNFQKDYDNVGMYRLEQNYRSTRNIVNAANS
IIAKNKEQLEKIVWTSNDDGSSIKIHRSTTDAEEGRFVAGSIWDHKMNEQLGNGEFAILY
RTNSQSRAMEDALRKRDIPYRIYGGLSFYQRKEIKDVLSYLRLVINPKDEEALKRIINFP
ARGIGQTTLDKLTVAANHYNRSIFEVIQNLDKINLKINAGTQRKLQDFTTMIQSFQIMNE
TADAFVMAEHVAKKSGILLEFKKDGTPEGIGKMENIEELLNGIKDFVEGQMEIADATGSI
GEFLEDVALATDLDNDKGDDDRVALMTIHLAKGLEFPYVYIVGMEEDLFPSGMSMNTRSE
LEEERRLFYVALTRAEKQAYLTYTQNRYRWGKLIDAEPSRFLEEIDEKYVENLTPIDTGY
RYKPLVDNDIFGEIDKSRLRQGKPTKGTPPPSGKKPNEGQLRKLRKLKPELATPIGNTNE
VDPNLAEGSIINHTRFGRGKVIKIEGVGNDRKAEIQFVKGDIKKLLLRFAKLEVIS
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaattttatagatgaattgaacgatgcccaaagagcacccgttctacataaagat
ggaccgttaatggttatcgccggagccgggtcagggaaaaccagggttcttacttatcgg
attgcgtatttaatgcaacaaggtgttgatcctttcaatattctggcgttaacgtttacc
aataaggcagcacgtgaaatgaaagagcgtattgccaagatagcgggtagatcggagact
aaaaacctttggatgggtacattccactccgtttttgccaagttgctaaggtttgatggc
gataaactgggttttcctagtaatttcactatttacgatacgcaagattcgcaacggctg
ctggcttccattattaaggaaatgggtctagataaagatatttataagtacaaacaggta
caaaatcgtatctcgtcatttaaaaacagtttaataactgttaaagcttatttgaaagat
cctgatttggtagaggcagatgctatggccaaaaaacccagaatgggagagatataccaa
aactatgtagatcgctgttttaaagcgggcgctatggattttgatgaccttttacttcgt
actaacgaacttttaaatcgttttcctgaagtattggccaagtaccaagataggttccga
tatattttggttgatgagtaccaagatacaaaccactcgcaataccttatagtgaaggca
ctagcagatcgttttcataacatttgtgtggtgggagatgatgcgcagagtatttattcg
tttcgtggggcgaatattagtaacatattaaactttcagaaagattatgataatgtgggc
atgtatcgcctagaacagaattataggtctacaagaaatatagtaaatgcggcaaactca
attatcgcaaaaaacaaagagcagctagagaaaatagtttggacgtcgaacgatgatggt
tctagcataaaaatacatcgtagtacaactgatgccgaagaaggtaggtttgtggctggt
tctatttgggaccacaagatgaacgagcaattgggtaacggtgaatttgctatactctat
cgtaccaactcgcaatcacgtgctatggaggacgcgctacgaaagcgtgatattccttac
cgtatttacggtggactttctttttatcagcgaaaagaaataaaggatgtattgagttat
ttgcgattggtcattaatcctaaagatgaagaagctcttaagcgtattatcaattttccg
gcaaggggtatcggtcaaactactttagacaagttaacggttgccgccaatcattataac
cgttccatttttgaggtgattcaaaaccttgataaaattaacctgaaaataaatgctggt
acgcaacgaaagttgcaggactttactaccatgattcaaagttttcagattatgaacgaa
actgccgatgcttttgtaatggcggagcatgtggccaagaagtcgggtattcttttagag
tttaaaaaagatggaactcccgaaggtattggcaaaatggagaatatcgaagagctactc
aacggtattaaagattttgtagagggacagatggaaattgccgacgctacaggaagcatt
ggtgaatttcttgaagatgtggcattggcaacagatttggataatgataaaggtgatgat
gaccgtgttgctcttatgaccattcacttagctaaaggtcttgaattcccatacgtttat
atcgtaggtatggaagaagatttattcccttccggaatgagtatgaacacgcgaagcgaa
ctggaggaggagcgaaggttattctacgtggcgcttacacgtgctgagaaacaggcatat
cttacctatactcaaaatagataccgatggggtaagttgatagacgcagaacctagtcgg
tttttagaggaaatagatgagaaatatgtagaaaatctcacaccaattgatacaggttac
cgatataagccacttgtagataatgatatttttggagagattgataaaagtaggttgcgg
cagggtaaaccaactaaaggaacaccaccgcctagcggtaaaaaacctaatgaaggtcaa
ctcagaaaactaaggaaattaaagccagaacttgctactcctattgggaataccaatgag
gtagacccaaatttagctgagggtagtatcattaatcatactcgttttggccgtggaaaa
gtaattaaaatagaaggcgtagggaatgaccgaaaagcggaaattcagtttgtaaaaggg
gatattaaaaagctattgcttcgttttgcgaagttagaggtcatttcataa
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