Zonotrichia leucophrys gambelii (white-crowned sparrow): 135441382
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Entry
135441382 CDS
T09958
Name
(RefSeq) hypoxia-inducible factor 3-alpha-like
KO
K09096
hypoxia-inducible factor 3 alpha
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135441382
Transcription factors [BR:
zle03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
135441382
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
HIF-1
PAS
PAS_4
Motif
Other DBs
NCBI-GeneID:
135441382
NCBI-ProteinID:
XP_064557000
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MRTYAGGAGAAEPPLRCLVLICEAIAHPGAIEAPLGSGTVLTRHSMDMKFTYCDDRIGEV
AGYHPEELLGCSLYEFVHALDSNTLSRSVHTLLIKGQAATSQYRFLAKRGGFLWAQTQAT
VMGGGRAAPRASLGTRGPGAPAFVRPPRARGRPRGPGFCSELVRLLAPIFDPPPATPAPQ
RRPRSPSPVQKIFGGSRSPGTTLQPPALDLAMLAPYIPMDGDFQLGGAEPQRGRGLRRPG
PAHKAEAPPPRRPRARSFPGRGPAPSRPGHALPRWGSDPALGHAPRPRPARKRPREPSPE
DPPGAPLKRAELDPQLLGLLLSGDPPGLSLGQEQPLVLLADGLTLPGTPQNPQGRGP
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgtacgcggggggcgcgggggccgcggagccgccgctgcggtgcctggtgctg
atctgcgaggccatcgcgcaccccggggccatcgaggccccgctgggctcgggcaccgtg
ctcacccgccactccatggacatgaagttcacctactgcgacgatcggatcggggaggtg
gccgggtaccaccccgaggagctcctgggctgttccctgtacgagttcgtgcacgcgctc
gactccaacaccctgagccgcagcgtccacaccctgctcatcaagggccaggctgccacc
agccagtaccggttcctggccaagcgcggggggttcctgtgggcgcagacccaggccacc
gtcatgggcggggggcgagcggccccgagggcatccctggggacccgggggcccggggct
cctgccttcgtgcgccctccccgtgccagaggccgcccaaggggaccgggtttctgctcc
gagctcgtccggctcctcgcccccatcttcgacccccccccggcgacccccgccccccag
cgccgcccccgcagcccctccccggtacagaagatttttggggggagccgcagccccgga
accaccctgcagccccccgccctggacctggccatgctggccccctacatccccatggac
ggcgatttccagctgggcggggccgagccccagagggggcggggcctgcgccgcccgggc
cccgcccacaaggccgaggccccgcccccgaggcgcccccgtgcccgcagcttccccggg
cgaggccccgccccctcccggcctggccacgccctcccgcgatggggcagcgaccccgcc
cttggccacgccccgcggccacgccctgctaggaagaggccgcgggagccgagcccggag
gatccccctggggcccccctgaaacgggcggagctggacccacaactgctggggctgctg
ctgagtggggaccccccaggactgagcctgggccaggagcagcccctggtgctgctggct
gatggtctgaccctgcccgggaccccccaaaacccccaggggaggggtccctga
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