Zonotrichia leucophrys gambelii (white-crowned sparrow): 135442114
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Entry
135442114 CDS
T09958
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3 isoform X1
KO
K06099
cold shock domain protein A
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
135442114 (YBX3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135442114 (YBX3)
03041 Spliceosome [BR:
zle03041
]
135442114 (YBX3)
Transcription factors [BR:
zle03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
135442114 (YBX3)
Spliceosome [BR:
zle03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135442114 (YBX3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
Bim_N
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
135442114
NCBI-ProteinID:
XP_064557731
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All DBs
Position
1A:complement(15911584..15929237)
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AA seq
286 aa
AA seq
DB search
MSEAPETSATSPAPAAPPVPAAAAAPPAPAVPDAAPKSPASAAAPSAAVAEAAPGAAAAA
TTAAAASAKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV
GDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYFGRRRGPPRSQGAE
GEIKDGVTEGGQLQQVHRNPTYRPRYRRGPPRPRPAPATGEAENKENHHEASAMSQQPLR
RGYRRPYNYRRRPRPASAPPQEGKEAKTTETPAENPAPVTEQSGAE
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcgccggagaccagcgccaccagccccgcgcccgccgcgccgcccgtcccg
gccgcggctgccgcgccgcccgcgcccgccgtcccggacgccgctcccaagagccccgcc
agcgccgccgcgccgagtgcggctgttgctgaggcggcccccggcgccgccgccgcagcc
acaaccgcggcggccgcgtcggcgaagaaagtgctggccaccaaagttcttggcacagtc
aagtggttcaatgtcagaaatggatatggctttatcaacagaaacgataccaaagaagat
gtgtttgttcatcagacggcgataaagaaaaacaatcctcggaagtacctgcgcagcgtt
ggtgatggagagactgtagaatttgatgtggttgagggagagaagggtgcagaggcagcc
aatgtcactggtccagatggagtccctgtggaaggcagccgctacgctgcagaccggcgc
cgctaccgacggggctactttggccggcgccggggcccacctcggagtcagggtgctgag
ggagaaatcaaggatggggtcacagaaggaggacaacttcagcaagtgcacaggaatcct
acctaccgtccccgctatcgcagagggccccctcgcccacgccctgccccggcgactgga
gaggctgaaaacaaggagaaccatcacgaggccagtgccatgagccagcagccgctgcgc
cgcggctaccggcgcccctacaactaccggcgccggccgcgcccagccagcgccccgcca
caggagggcaaggaggcaaagacaactgaaacacctgctgaaaatcctgctccagtgaca
gagcagagtggtgctgagtaa
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