Zonotrichia leucophrys gambelii (white-crowned sparrow): 135442231
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Entry
135442231 CDS
T09958
Symbol
PUS7L
Name
(RefSeq) LOW QUALITY PROTEIN: pseudouridylate synthase PUS7L
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zle03016
]
135442231 (PUS7L)
Enzymes [BR:
zle01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
135442231 (PUS7L)
Transfer RNA biogenesis [BR:
zle03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
135442231 (PUS7L)
Prokaryotic type
135442231 (PUS7L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
135442231
NCBI-ProteinID:
XP_064557878
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Position
1A:complement(18296381..18308034)
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AA seq
773 aa
AA seq
DB search
MGGGGGGGRGGRGAPWWRLSGAXGAPASLCLSVPRSLRASVRPSSHPCLPPSPPFNSLSV
AVDALPPLSPFPVRXWRGAGQAAAMLPSFSYLTEHTGFRGTIKNAPGDFVVTELEVPELF
LGDSRAELLPKSSEAAQSSPCPREPKRRRTEPPGCPRDSAPRAAGQGPGRAGGGCAALPG
KTGREGEPELQPGLGEAPVLESLLGEPVSGLLHKFACDVKDAWHSGNSADAAAREFSLGP
RLDKKIRADLHSAVRQKFPFLVTLTKDNEMIVKGNPDYKELCQLVTEKETSGFFKFLDAK
LENSTFSFEADGNKEHRKTVHHFINRKFGKLLETKSFTVTDVSDQPSTSIMVRFREKSGS
RKRCAGGFQEKQDVYTAFTLQKENLETLEAIGLLAAELDVLPSDFSYTGIKDKKAITLQP
MVVKKVTPERLKEIGNKMEKKGMKIYNIRPAQQHLRLGQLKGNHFDIVVRDLQHHSHDSS
ADLKERIAEAVESVETKGFVNYYGPQRFGQGQIVQTDQIGLALLNEKMVKAVKLFFTPED
TDDPVNNAKRYFLQTEDAKGTLVMLPEFKVREKMLLRALNRYGVNHEGCTKGWLNIPHSL
RIFYVHAYCSKIWNEAASYRLKTYGSKVVEGDLVFLEENDESNSLNDKVHVVTAAEESAN
KYSIYQVVLPMVGHSIKYPSNKVGQWYRERLSKDELELCKFRVSPLQLNIPGCYRLILKN
VKNLSYFLESSEKVIKIEDDHLNDLKVSLHISFDLDPSCYATVCLREIMKCDF
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaggcggagggggaggaagaggaggccgtggcgccccctggtggcggctttcg
ggggcgnncggcgctcccgcctcgctgtgtctgtccgtgccccgctccctccgtgcgtcc
gtccgtccgtccagccatccctgcctgcctccctccccgcctttcaacagcctttccgta
gcagttgatgctcttccgcccctctccccttttcctgtccggncctggcggggcgcaggg
caggccgcggccatgctgccctccttcagttacctgactgagcacaccggcttccgcggc
accatcaaaaacgcgcccggggacttcgtagtgacggagctcgaggtgcccgagctcttc
ctcggggactcccgagctgaattgctcccgaagagcagcgaagcggcacagagcagcccg
tgtccgcgggagcccaaaagacggaggacggagccccccgggtgcccccgggattctgct
cccagagctgcggggcagggcccaggccgggcgggaggcggctgtgctgcactcccgggc
aaaaccgggcgtgagggagagcccgagctgcagcccggcctcggggaagccccagtgttg
gaatccttgctcggcgagcccgtgagcgggctgctccacaagtttgcctgcgatgtgaag
gatgcgtggcactcgggaaacagcgcggatgctgctgctagggagttctcgctaggaccg
aggctggacaagaaaattcgggctgatttacacagtgctgttaggcagaaattccccttt
ctagtcactcttacaaaagacaacgaaatgattgtaaaagggaatcctgattataaagaa
ctttgtcaattagtgactgaaaaggaaacaagtggtttctttaaatttttagatgcaaag
ctagaaaattctacgttttcctttgaggctgatggaaacaaagagcacagaaaaacagtt
caccactttatcaatagaaaatttggaaagcttttagaaacaaaatcttttaccgtgaca
gatgtcagtgatcagccaagtacatcaataatggtacggtttcgagaaaaaagtgggtcc
agaaaaaggtgtgctggtggctttcaggagaagcaagatgtttatacagctttcaccctt
cagaaagaaaacctagaaacactagaagcaatcggcttgctggcagctgagcttgatgtt
cttccttcagacttcagttacactggcatcaaagataagaaggctatcactttgcagcct
atggtggtgaagaaggtgactcctgagaggttgaaggaaattggaaataaaatggaaaaa
aaaggcatgaaaatatacaacatccgtccagcacagcagcacctcaggcttggtcagctg
aagggcaatcactttgacatagttgtgagagacctccagcaccacagccatgactcctct
gcagatttgaaggagagaatagctgaagcagtggaaagtgttgagacaaaaggttttgtg
aattactacggacctcagcgatttggacaaggacaaattgttcagacagatcaaatagga
ttggctttactgaatgaaaaaatggtgaaagctgtgaagttatttttcacacccgaagat
acggatgatcctgtaaacaatgcaaaaagatactttcttcaaactgaagatgcaaagggc
acacttgtaatgctgccagaatttaaagtgagagagaagatgttgctacgagctttaaac
cgctatggtgtaaatcatgaaggttgtaccaaaggatggctcaacattcctcactccttg
cgcatattctatgtccatgcttattgcagtaaaatttggaatgaagcagcatcatacagg
ctgaagacttatggctccaaagtggttgagggtgatcttgtcttcttggaagaaaatgat
gaaagcaattccctgaatgacaaggttcatgtagtcactgctgcagaagaatcagctaac
aaatattctatataccaagtggttcttccgatggtgggacacagtatcaagtatcccagt
aataaagttggacaatggtaccgtgaaagactttctaaggatgagctggagttgtgcaaa
ttcagagtgtctccattacagctaaatatacctggatgctacagactcattttgaaaaat
gttaagaatctctcatattttttggaaagtagtgaaaaagtgatcaaaattgaggatgac
catctgaatgatttaaaagtctctcttcatatatcatttgaccttgatccttcatgttat
gcaacagtctgtctgagagaaataatgaaatgtgatttttaa
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