KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135442340
Entry
135442340         CDS       T09958                                 
Symbol
POC1B
Name
(RefSeq) POC1 centriolar protein homolog B isoform X1
  KO
K16482  centriolar protein POC1
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:zle00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zle03036]
    135442340 (POC1B)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:zle03037]
    135442340 (POC1B)
Chromosome and associated proteins [BR:zle03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    135442340 (POC1B)
Cilium and associated proteins [BR:zle03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   135442340 (POC1B)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WDR55 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_TEP1_C NBCH_WD40 Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_Vps41 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N RMC1_N eIF2A Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_IP5PC_F Beta-prop_WDR75_2nd Beta-prop_NUP159_NUP214 THSD1_N
Other DBs
NCBI-GeneID: 135442340
NCBI-ProteinID: XP_064558109
LinkDB
Position
1A:complement(31310890..31356073)
AA seq 479 aa
MASPLEDPVLIRRFRGHTAAVTGVAFDANAAELVTCSVDSLLILWKLRTPCSAYRFSGHA
EAVTSVEFSPDGRVLASASQDHTVRLWIPCIYGESSVLKGHTAPVRSVSFSHDGCSVVSA
SNDKLIKIWSVCSQRLLFTLFQHTGWVCCAKFSPDGRIIASCGEDKSIKLWDTRNKICIN
TFSDYEGFPTFVDFNPSGTCIASAGSNNTVKLWDIRTNKLLQHFKVHRAGVNCISFHPSG
NYLITASSDGTLKILDLLGERLIYTLHGHKGPVLCVSFSKGGESFASGGVDAQVLLWKTN
FDTLDYEEVLKHNFRRTHIDDPPHLLDVYPRSCHFHDETITSVEVDPTFDVPDMQTPDPV
IFDIRTSSYMSTPEKHAFENKKCLWSDGRSEELPSPCDSPSARSSKRKAESESGSAVLSV
EQPRGISSSMDWALDHIVGQLEMLTVTISVLEERLTCTEDKLKECIKDQQKMLLKGKQN
NT seq 1440 nt   +upstreamnt  +downstreamnt
atggcctccccgctggaggaccccgtcctgatccggcgtttccgcggccacacggcggcg
gtgacgggcgtcgccttcgacgcgaacgcggcggagctggttacctgctctgtggacagc
ctgctcatactgtggaagctgaggacaccgtgcagcgcctacagattttcagggcatgcg
gaagcggtgacaagtgtagagttctctccagatgggcgggtgctggcttcagcttctcag
gatcacacggtcaggctatggattccttgcatttatggagaatcatcagtactgaaaggt
catacagcacctgttcggagtgtgagcttctcccatgatggctgctctgtagtttcagca
tccaatgataaattaataaaaatatggagtgtttgctctcagcgccttttgtttacgcta
ttccaacacactggttgggtttgctgtgccaaattttcgcctgatggaagaataatagca
tcttgtggtgaggacaaatctattaaactctgggatacaagaaataaaatttgcattaat
accttctcagattatgaaggatttccaacttttgtggatttcaacccaagtggaacatgt
atagcttctgcaggttccaataacacagtgaaactatgggatattcgaacgaacaagcta
ctgcagcatttcaaagttcacagagcaggggttaattgtatatcattccatccttctggt
aactacctcatcactgcttcttctgacggtacccttaagattctggacctcttaggagaa
agacttatttacactcttcatggacacaagggacctgtactttgtgtgtctttttcaaaa
ggtggtgaaagttttgcctcaggtggagtggatgctcaggtgttactatggaaaaccaac
tttgatactttggattatgaagaagttctcaaacacaattttagaagaacacatattgat
gatcctcctcatcttcttgatgtttacccaaggtcatgtcatttccatgatgaaacaatt
acatcagttgaggttgaccctacctttgatgtgcctgatatgcaaacacccgacccagtt
atctttgatattagaacatcttcatatatgagtactcctgagaaacatgccttcgagaac
aagaaatgcctctggagcgatggcagaagtgaagaactgccgagtccctgtgattctccc
tcagcaagaagttcaaaaaggaaggcagagagtgagagtgggtcagctgtgcttagtgtg
gagcagcccagaggcatctcctcctccatggactgggctttggaccacattgtgggccag
ctggagatgctaactgtaaccatttcagtcctggaagaacgtcttacttgtacagaagat
aaattgaaagaatgcataaaagatcagcaaaaaatgttgcttaagggaaaacagaactaa

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