Zonotrichia leucophrys gambelii (white-crowned sparrow): 135442446
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Entry
135442446 CDS
T09958
Symbol
IFT56
Name
(RefSeq) intraflagellar transport protein 56 isoform X1
KO
K19685
intraflagellar transport protein 56
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
zle03037
]
135442446 (IFT56)
Cilium and associated proteins [BR:
zle03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
135442446 (IFT56)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
ANAPC3
TPR_14
TPR_16
TPR_2
TPR_8
TPR_17
TPR_9
TPR_12
TPR_6
Coatomer_E
TPR_1
Motif
Other DBs
NCBI-GeneID:
135442446
NCBI-ProteinID:
XP_064558321
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Position
1A:36938142..36993706
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AA seq
556 aa
AA seq
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MMLSRAKPAVAGTPPPGDRRRKKGKEVPQLEELLAQRDFTGAIALLEFKQHVAEEEEEED
GSLWIGYCAFHLGDYKRALEEYEALTKQATCKPEVWVNLACTYFFLGMYTQAEQAALKAP
KSGLQNRLLFHLAHKFSDEKKLMSSHQNLQDVTEDQLSLASIHYMRSHYQEAIDIYKRIL
LDNREYLALNVYVALCYYKLDYYDVSQEVLAVYLQQVPDSTIALNLKACNHFRLYNGKAA
EAELKNLTDSASSSFEFGKELIKHNLVVFRGGEGALQVLPPLVDVIPEARLNLVIYYLQQ
DDVQEAYNLIKDLEPTAPQEYILKGVVNAALGQEMGSRDHLKIAQQFFQLVGESASECDT
IPGRQCMSSCFFLLRQFPNVLIYLNSIKSYFYNNDTFNFNYAQAKAAMGNFSEAEEVFLL
IQSEKIKSDFVYLSWLARCYIMNKKPQLAWKLYLKMETSGDSFNLLQLIANDCYKMRQFY
YSAKAFDILERLDNNPEYWEGKRGACVGIFQMILAGREAKETLREVLHLLKSTGNSQVEY
IVRVMKKWAKENRVPV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgatgctctctcgggccaagccggccgtggcaggtaccccgccgccgggagacaggcgg
aggaagaaagggaaggaggtgccgcagttggaagaactcttggcccagagggacttcacc
ggcgcgatcgccttgctggagtttaagcagcacgtggcggaggaggaggaagaggaggat
ggcagcctttggattggatactgtgcgtttcatttgggtgactacaagagagctctggag
gaatatgaggctttaaccaagcaagcaacttgcaaaccagaggtttgggtgaaccttgcc
tgtacctacttctttctggggatgtacacgcaagcagaacaagcagccttgaaagcacct
aagagtggtctccagaaccgtttactctttcacctggcacataagttcagtgatgaaaag
aaactgatgagctctcaccagaacctgcaggatgttacagaagatcagctgagcctggca
tccatccactacatgcggtcccactaccaagaagccattgatatctacaagcgcattctg
ctggacaatcgggaatacctggctctgaatgtatatgtggccctgtgctattacaaactg
gattactatgatgtctcacaggaagtgctagctgtttatcttcagcaagttcctgacagc
accattgctcttaacctgaaggcttgtaaccatttccgactttacaatggaaaggctgca
gaggcagagctcaaaaacttgacagacagtgcctcatcatcttttgagtttggcaaggag
ctcattaagcacaatctggtggttttccgaggaggagaaggggctttgcaagtcctgcct
cctctggttgatgttattcctgaggcaagattgaatcttgtgatttactatctccagcaa
gatgatgtgcaggaggcttataacctgattaaggacctggaacctacagctccacaggag
tacatcctcaaaggggtggtaaatgcagcacttggacaagaaatgggctcgagagatcat
ctgaaaattgctcaacagttctttcagttggtgggggaatcagccagtgaatgtgatacc
attccagggagacagtgcatgtcctcctgcttctttcttcttagacaatttcctaatgtc
ctaatttacctcaactcaatcaagagttacttctacaacaatgacacttttaatttcaac
tatgcccaagccaaagctgcaatgggcaattttagcgaagctgaagaggtgttccttttg
atccagagtgagaagataaaaagtgattttgtttaccttagctggctggctcgctgctat
attatgaataagaaaccacagctagcctggaaactctatctgaagatggaaacatcaggg
gactcctttaacctattgcagctcattgcaaatgattgttacaaaatgcgtcagttttac
tattcagccaaagcctttgatattctggagagactggataataatcctgaatactgggaa
ggcaagagaggtgcttgtgtgggtatatttcaaatgatcttagctggacgagaagcaaaa
gagactttgcgggaagttctgcaccttctgaagagcactggtaattctcaagtggagtac
attgttcgcgtcatgaaaaagtgggccaaggagaaccgagtccctgtttga
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