Zonotrichia leucophrys gambelii (white-crowned sparrow): 135442479
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Entry
135442479 CDS
T09958
Symbol
TOB2
Name
(RefSeq) protein Tob2
KO
K14443
protein Tob/BTG
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135442479 (TOB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135442479 (TOB2)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135442479 (TOB2)
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
135442479 (TOB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
Motif
Other DBs
NCBI-GeneID:
135442479
NCBI-ProteinID:
XP_064558394
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Position
1A:37699217..37704821
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AA seq
340 aa
AA seq
DB search
MHLEIKVALNFIISYLYNKLPRRRADLFGEELERLLKKKYEGHWYPEKPLKGSGYRCVHI
GETVDPVVELAAKRSGLAVEDVRANVPEELSVWIDPFEVSYQIGEKGSVKVLYLDDSEGC
SATELDKEIKSSFNPDAQVFVPIGSQDNSLSNSPSPSFGQSPSPTFIPRSAQPITFTTAT
FAATKFGSTKMKKGGGAGGGGGGAGAVQQPRMVRSPTTNLLKHKGLSLSMHSLNFVGSAG
SQAPQSQLSPNAKEFVYSGASPGASSLFFDGVASESQASSIPPASQFNASTGGTFDMAQV
FGGSTNSLFLEKSPFVEGLSYNLNAMQYPSQSFQPVVLAN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcatctggagatcaaagttgctcttaacttcatcatctcatacctgtacaacaagctt
cctcggaggcgggcagacctgtttggtgaggagctagagcgcctgctgaagaagaaatat
gagggtcactggtacccagagaaacctctgaagggatctggctatcgctgtgttcacata
ggggagacggtggatccggtggtggagctggcagccaagcggagcgggctggctgtggag
gatgtgcgtgccaacgtgccagaagagctgagtgtctggattgatccttttgaggtttcc
taccagatcggtgagaagggctctgttaaggttctctacctagatgacagtgagggctgc
agtgccacagagctggacaaagaaatcaagagcagcttcaaccccgacgcccaggtattt
gtccctatcggcagccaggacaactcgctgtccaactctccgtccccctcctttggccag
tcacccagccccaccttcatccctcgctctgcacagcccatcactttcaccactgccacc
tttgctgccaccaagttcggctcgaccaagatgaagaagggtggaggagccggaggaggg
ggcggtggagcaggggctgtgcagcagccgagaatggtcaggtctcccaccaccaacctg
ctgaagcacaagggcctctccctgtccatgcactctctgaacttcgtcgggagtgctggg
agccaagccccgcagtcccagctctcccccaatgccaaggagttcgtttacagcggcgcc
tcaccgggagccagcagcctcttcttcgatggtgttgccagtgagagccaggccagcagc
atcccgccagcatcgcagttcaacgccagcacgggtggtaccttcgatatggctcaggtc
ttcggtggcagcaccaatagcctctttttggagaagtctcccttcgtggaaggactcagc
tacaacctgaatgccatgcagtatcctagccagtcgttccagcccgtcgtcctggccaac
tga
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