KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135442535
Entry
135442535         CDS       T09958                                 
Symbol
POLR2F
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03020  RNA polymerase
zle03420  Nucleotide excision repair
zle04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:zle00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    135442535 (POLR2F)
  09124 Replication and repair
   03420 Nucleotide excision repair
    135442535 (POLR2F)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    135442535 (POLR2F)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zle03021]
    135442535 (POLR2F)
   03400 DNA repair and recombination proteins [BR:zle03400]
    135442535 (POLR2F)
Transcription machinery [BR:zle03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     135442535 (POLR2F)
  RNA polymerase III system
   RNA polymerase III
     135442535 (POLR2F)
  RNA polymerase I system
   RNA polymerase I
     135442535 (POLR2F)
DNA repair and recombination proteins [BR:zle03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      135442535 (POLR2F)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 135442535
NCBI-ProteinID: XP_064558497
LinkDB
Position
1A:complement(39293222..39297149)
AA seq 127 aa
MSDNEDNFDGDDFDDVEEDEGLEDLENAEEEGQENVEILPSGERQQANQKRITTPYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGV
DELIITD
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtccgacaacgaggacaactttgacggggatgacttcgatgatgtggaggaggatgag
ggcctggaggacctggagaacgcggaggaggagggacaggagaacgtggagattctgccc
tcgggagagcggcagcaggcaaaccagaagcgcatcacgaccccctacatgaccaagtac
gagcgagccagagtcctgggcactcgtgccctgcagatagcgatgtgtgcccctgtgatg
gtggagctggaaggagagacagaccccttgctcattgccatgaaagaactcaaagcacgc
aagatccccataatcatccgtcgttaccttccagatgggagctatgaagactggggtgtg
gatgagttaattatcacagactga

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