Zonotrichia leucophrys gambelii (white-crowned sparrow): 135442581
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Entry
135442581 CDS
T09958
Symbol
PRDM4
Name
(RefSeq) PR domain zinc finger protein 4
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135442581 (PRDM4)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
135442581 (PRDM4)
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
Zn_ribbon_PRDM4
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_16
SET
zf-C2H2_jaz
zf-met
Zn_ribbon_Com
Motif
Other DBs
NCBI-GeneID:
135442581
NCBI-ProteinID:
XP_064558578
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Position
1A:41570300..41586500
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AA seq
800 aa
AA seq
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MHPRMNEMNLSPVGMDQLTSSSVSNALPVSGSHLGLAASPTHSAIPAPGLPVAIPNLGPS
LSSLPSALSLMLPMGIGDRGVMCGIPERNYTLPPPPYPHLESSYFRHILPGILSYLADRP
PPQYIHPNTINVDSNPALSVSNNPSALDPYQPSGTVGLEPGIVSMDSRTVSTHGPQNLHP
SDSQEVALDTTITMESVSRVTSPISTDGMAEELTMDDVAGDHTQIPNGSRSHEPLAVDTV
GSNLTSDAVGHSTVIPIHGSTLELPVVMEPEHIAGRVTGMSDSTLNDPIHTVAMSTNSVS
VALPTSHNLTSLDSVALHEVGLSLEPVAVSSMSQEVAMGPSHVDVSADNLAFVPSSLQME
DSNSNKENMATLFTIWCTLCDKAYPSDCPDHGPVTFVPDSPIESRARLSLPKQLLLRQSI
MGAEAGVWTRETIPVRTCFGPLIGQQSHSLEVADWTDKAASHIWKIYHNGVLEFCVITAD
ENECNWMMFVRKARNREEQNLVAYPHDGKIYFCTSRDIPPEHELLFYYSRTYARQLGVPE
HPDVHICHCGKECASYADFKAHLSSHIHNHLPSQGHSSSHGPGHGKERKWKCSMCPQAFI
SPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQKAH
LESHMVIHTGEKNLKCDYCEKLFMRRQDLKQHVLTHTQERQIKCPKCDKLFLRTNHLKKH
LNSHEGKRDYVCEKCSKAYLTKYHLTRHLKICKGPTSSLSAPEEEEEEDSEEELIDSMRT
EDCRINNGVYSTGDVLSGHK
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgcaccccagaatgaatgaaatgaacttgagtcctgtagggatggaccagctgacctcc
tcctctgtgagcaatgccctgccagtgtcaggaagtcacttgggcttggcagcgtcaccc
actcacagcgccataccagcaccaggcttgcctgttgcaattccaaacctgggcccctcc
ttgagttccttgccctctgctctgtctctgatgctcccaatgggtattggagatcgagga
gtgatgtgtggtataccagagagaaactataccctacctccaccaccataccctcacctg
gagagcagctatttcagacacattctacctggtatcttatcttacttggctgacagacca
ccacctcagtacatccatcccaacactataaatgttgacagcaatccagcattgtcagtc
tccaacaatccctcagccctggatccctaccagcccagtgggaccgtggggctggaacca
gggattgtctccatggactcccgcacagtgagcacacacggtcctcaaaatctgcatcct
agtgacagccaagaggtagcactggatactacaatcaccatggagagcgtttccagggta
accagccccatctccacagatgggatggcagaggagcttacaatggatgatgtagctggg
gatcacacgcagatcccaaacggctcccggagccacgaacctttagccgtagacacagtg
ggcagtaacttgacatcggatgctgtgggacacagcaccgtcattcccattcacggtagc
actttggaactccctgttgtcatggagcccgagcacattgccggccgggtgacagggatg
tcggacagcacactaaatgaccccatccatactgtggccatgagcaccaactccgtgagt
gtggcgctccctacctcacacaacctcacttccctggactcagtagccttgcatgaagtg
ggcctcagcctggagcccgtggcagtgtcttccatgagtcaggaagtagccatggggcca
agccatgtcgatgtgtctgcagacaatcttgcctttgtaccatcatctctgcaaatggaa
gactccaattccaacaaggaaaacatggcaaccttgtttaccatatggtgcacgctgtgt
gacaaggcgtatccgtcagactgcccggaccacgggcccgtcacctttgtccccgacagc
ccaatcgagagccgagccaggctgtccctcccgaagcagctgctgctccggcagtccatc
atgggagctgaggcgggtgtgtggacacgagaaaccattcctgtgaggacttgtttcggg
cctctgatcgggcagcagagccattctctggaggtggccgactggacagacaaagcagcc
agtcacatctggaagatctatcacaatggtgtcctggagttctgtgtcatcacagctgat
gaaaatgagtgtaactggatgatgttcgtacgcaaagccaggaaccgggaagagcagaac
ctggtagcttatcctcacgatggaaaaatttacttctgcacctctcgggacatcccccct
gaacacgagcttctcttctattacagtcggacctatgcacgacagcttggtgtccctgag
catccagacgtgcacatctgccactgcgggaaggaatgcgcttcctatgcggacttcaag
gcccatttgagcagccatattcacaaccacctccccagtcaggggcacagcagcagccac
gggccaggccacggcaaggagaggaagtggaagtgctccatgtgcccccaggctttcatc
tccccttccaagctgcacgtgcacttcatggggcacatgggcatgaagccacacaagtgc
gatttctgtagcaaagctttcagtgatccaagcaacttacggacacacctcaagatccac
acaggtcagaagaattaccgctgcaccctctgtgacaaatcgttcacgcagaaggctcac
ctggagtcgcacatggtcattcacaccggggagaagaacctcaagtgcgattactgcgag
aagctcttcatgcgcaggcaggacctcaagcagcacgtcctcactcacacacaagaacgg
cagatcaagtgccccaagtgtgacaagctgtttctgaggacaaatcacctgaaaaagcat
ctcaattcacatgaaggaaagagggactatgtctgtgaaaaatgctccaaggcttatcta
accaaatatcacctcacacgacatttaaaaatatgtaaaggccctacatccagtctgtca
gccccagaggaggaagaggaggaggattcagaggaggaattaatagactctatgaggact
gaagactgtaggattaacaatggcgtctattcaacaggtgatgttctctctggacacaaa
tga
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