Zonotrichia leucophrys gambelii (white-crowned sparrow): 135442593
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Entry
135442593 CDS
T09958
Symbol
RFX4
Name
(RefSeq) transcription factor RFX4 isoform X1
KO
K09174
regulatory factor X 4
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135442593 (RFX4)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Other basic domains
RF-X
135442593 (RFX4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
135442593
NCBI-ProteinID:
XP_064558596
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Position
1A:complement(41968275..42056736)
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AA seq
735 aa
AA seq
DB search
MHCGLLEEPDMDSTESWIERCLNESENKRYSSHTSLGNVSNDENEEKENNRASKPHSTPA
TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLG
TRGQSKYHYYGIAVKENSQYYDVMYSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPE
FPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHD
LPENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITK
QTLYTMEDSREEHRKLIIQLYQEFDHLLEEQSPIESYIEWLDSMVDRCVVKVAAKRHGSL
KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQEKANEL
MRAMKGEGSTAEIREEIILSEPAAPTPSPAPFSPAKSATSVEVPSAPSPINNQSPEYGGI
TATTGAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRSPHVPASSVTHRIPVYPHREEHGY
TGSYNYGSYSNQHPHPMQSQYPSLPHDAAISGPLHYSAYHRSSSQYPFNGPTSRMEPCLM
SSTPRLHPTPVTPRWPEVPAANSCYTSSSMHSTRYGNSSDMYAPLTTRRNSEYEHMQHFP
GFAYINGEATTGWAK
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgggttgctggaggaacccgatatggactccacagagagttggattgaacga
tgtctcaatgaaagtgaaaacaaacgttattccagtcacacctctctggggaatgtttct
aatgatgaaaatgaggaaaaagaaaataatagagcatcaaaaccgcattcaactccagct
acactgcaatggctggaggagaattatgagattgcagaaggtgtttgcattcctcgaagt
gctctctacatgcattacttggacttctgtgagaaaaacgacacacaacctgttaatgct
gccagttttgggaagataataagacaacagtttccacaactaacgacaagaagactcgga
acaagaggccaatcaaagtaccattattatgggattgcagtgaaagaaaactcccagtat
tatgatgtgatgtattctaaaaaaggagcagcctgggtcaacgagacgggaaaaaaagaa
gtaaccaaacagacagtggcgtattcaccacgatccaaactgggaacattgctgccagag
tttccaaatgtcaaagatctaaatctgccagccagtctgccggaggagaaggtttctacc
tttattatgatgtataggacgcactgtcagaggatactagacactgtaataagagcaaat
tttgatgaggttcaaagttttcttctgcacttttggcaagggatgcctcctcatatgctg
cctgtactgggttcttcaactgtagtgaatatagtgggagtttgtgactcaattctgtac
aaggcaatttctggagttttgatgccaacagtactacaagccttacctgacagtttgacg
caggtgatccgaaagtttgcaaagcaactggatgagtggctgaaagtagctctccatgat
ttaccagaaaacctacgaaatatcaaatttgagttgtccagaagattctcacaaatacta
cggcgacagacatcactaaatcatctctgccaagcatcaagaacagtgatccacagtgca
gacatcacatttcaaatgctggaggactggaggaatgtggatctgaatagcattaccaaa
caaaccctctatactatggaggactcacgggaggaacacagaaagctcatcatacaattg
tatcaggagtttgatcaccttttggaggagcagtcccccattgagtcatacatcgagtgg
ctggattccatggtggatagatgtgttgtaaaggtagctgccaagagacacggctctttg
aagaaagtagctcagcagtttcttctgatgtggtcctgttttggcactcgagtgatccgg
gacatgactttgcacagtgcacccagctttgggtcttttcaccttattcacttgatgttt
gatgactacgtattgtacctgctagaatcactccattgtcaggagaaagcgaatgagcta
atgagggcaatgaagggagaaggaagcacagcagaaatacgagaagaaattattctcagt
gaaccagctgctccaactccctccccagcaccattctccccagctaaatctgccacctct
gtggaagtgccctctgccccatcacccatcaacaaccagtccccagagtatggtggcata
acagccactacaggggctatgcaatcctacacatggtcgctcacctacactgtgacaaca
gctgctgggtcacctgctgagaattcccaacagctgccctgcatgaggagcccacacgta
cctgcttcatctgtcacacaccggatacctgtttatccccacagagaagagcatggatac
acaggaagttacaactatggtagctatagcaaccagcatccccatccaatgcagagtcag
tatccatccttaccacatgatgctgctatttctggaccacttcactactcagcttaccac
agaagctcttcacagtaccccttcaatggcccaacatcaagaatggagccctgtttgatg
agcagtactcccaggctgcatcccacaccagtgactccgcgctggccagaggtcccagct
gccaactcctgctacaccagctcctccatgcactccacaagatatggcaattccagtgac
atgtatgcgcccttgacaacacgcaggaattctgagtacgagcacatgcaacactttccc
ggctttgcatacatcaatggggaagccactacaggctgggctaaatga
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