Zonotrichia leucophrys gambelii (white-crowned sparrow): 135442712
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Entry
135442712 CDS
T09958
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04510
Focal adhesion
zle04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135442712 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135442712 (LAMB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
OVT1
Motif
Other DBs
NCBI-GeneID:
135442712
NCBI-ProteinID:
XP_064558897
LinkDB
All DBs
Position
1A:57834898..57877199
Genome browser
AA seq
1785 aa
AA seq
DB search
MGRLPLYLCCCLALWPAAAQEPEYSYGCAEGSCYPATGDLLIGRAARLSASSTCGLRQPE
PYCIVSHLQEDKKCFICDSEDPFHDTLNPDSHRIENVVTTFDPNRLKLWWQSENGLENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGQTWHVYRYFAYDCESSFPGISTGPM
KKVDDIICDSRYSDIEPSTEGEVIYRVLDPAFRIEDPYSPRIQNLLKITNLRVKFVKLHT
LGDNLLDSRMEIREKYYYAIYDMVVRGNCFCYGHASECAPVEGLDEEVEGMVHGHCMCRH
NTKGLNCEQCMDFYHDLPWRPAEGRNSNACKKCNCNGHSSQCHFDMAVYMTTGNTSGGVC
DDCQHNTVGRNCEQCKPFYFQHPERDLRDPDVCEPCNCDPAGSQNGGICDRYTDFSTGLI
AGQCRCKLFVEGERCDLCKEGFYGLSADDPAGCQSCACNPLGTHPGGNPCDPETGNCYCK
RLVTGKQCNQCLPEHWGLSNDMDGCRPCDCDQGGALNNNCSSESGQCECRPHMFGRQCNQ
VEPGYYFISLDHYIYEAEEANLGPGVNIIERQYTPDRTPSWTGIGFVRVPEGGHLEFYID
NIPYSMEYDVVIRYEPQLPDQWEKAVISVTRPGKIPTGSRCGNTVPDDDNQVVSLSPGSR
YVVLPRPVCFEKGLNYTIRLELSQYSSVDTETENPYTLIDSLVLMPYCKSLDIFTVGGSG
EDVVTNSAWETFQRYRCLENSRSVVKTPMTDVCKNIIFSISALLHETALSCQCDPQGSLS
SVCDPNGGQCQCRPNVVGRQCDRCAPGTFGFGPSGCRPCECHARGSYNAFCDVETGQCHC
FPGVYGRQCDRCLPSFWGFPSCQPCHCNGHADDCNPYTGECLSCRDHTAGHNCERCQAGY
YGDPILGSGDHCRPCPCPDGPESGRQFASGCYQDPVTLQVVCVCSVGYIGSRCDECASGF
FGSPDEVGGACQPCQCNNNIDTTDPEACDKRSGACMKCLYHTEGENCHLCREGYYGSALQ
QDCRKCVCNYLGTVREDCEDSESCRCAAATGQCRCLPNVVGQTCDRCAPHTWRLASGTGC
EHCDCDPARSLGPACNEFTGQCHCMPGFGGRTCRECQELFWGDPSVECLACDCNPRGIQT
PQCDRATGQCICNEGVEGLHCDKCSRGYSGVFPDCVPCHQCFALWDVIISELANRTQQFL
DRANTLKITGVTGPYQQTLNTLEEKLTEIKTIIAQNPAAEPLKNIGNLFEEAEKLTADVT
VKIADIEENLSALSAKSNSTDTDLSALETDAKSLDHVVKELAEQLEFIKISDVRGALDSI
TKYFQMSQEAEERVNASTVDPDSAVELSARTRQEVQALINEKEAQFKANQEEQSRLLDEL
AGKLQSLDLSEVAEKTCGSAPGASCAESECGGLSCRTDEGKKKCGGPGCDGLVTVAHNAW
QKAMDFDRDILSALAEVEQLSRMVSEAKQRADEAKQNAQAVLLKTNATKEQVDRSNEDLR
NLIKQIRDFLMQDSADLDSIEAVANEVLSMEMPSTPQQLQALTEDIRERVESLSDVEVIL
QQSAGDIARAEMLLEEAKRASKGATDVKVTADMVKAALEEAEKAQNAAEKAIKQADEDIK
GTQDLLTSIESENVASAETLNNATLRLFELEKSVEDLRQKAATNSGTVGNIEDKIISAKQ
NAEEVQKVLSSELSGKYRTVEELIARKTEESAEARRKAGVLQDEAKALLAQANSKLQLLK
DLENTYENNQKVLEDKAKQLVELEETVRSLLQTISQKVAVYSTCL
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcctcccgctgtacctctgctgctgcctcgcgctgtggcccgcggcggcacag
gagcccgagtacagctatggctgcgccgagggcagctgttaccccgccaccggcgacctg
ctcatcggccgcgccgcccgcctctccgcctcctccacctgcggcctccggcagcccgag
ccctactgcatcgtcagccacctccaggaggacaaaaaatgtttcatatgtgattcggag
gatcccttccacgatactctcaatcccgacagccatcgcattgaaaatgttgtcaccacg
ttcgacccaaaccgcctgaagctctggtggcagtcggaaaatggtttggaaaatgtgact
atccagctggacctggaggctgagtttcatttcactcatctcattatgaccttcaagaca
ttccgtcctgctgcaatgttgattgaaagatcatctgactttggacagacctggcacgtt
tacaggtattttgcatacgactgtgagagctcctttcctgggatttcaactggacccatg
aagaaagtggatgatataatctgtgattcccgatactctgacattgaaccttcaacagag
ggagaggtaatatatcgtgttctagatcctgcttttcggattgaagatccatacagtcca
aggattcagaacctattgaagatcacaaacctgagagtcaaatttgtcaagctgcacact
ctgggagacaacctgttggactccaggatggagatccgagagaagtactactatgccatc
tacgacatggtggttcgcgggaactgcttctgctacgggcacgccagcgagtgcgcgccc
gtggagggcttggatgaggaggtggaaggaatggttcatggtcactgcatgtgcagacat
aataccaaaggattaaactgtgagcagtgtatggatttctaccatgatctaccctggcgc
cctgctgaaggtcgcaatagtaacgcatgcaaaaagtgcaactgcaatggccactccagc
cagtgccactttgacatggcagtgtacatgacaacggggaacaccagcgggggggtgtgt
gacgactgccagcacaacactgtgggccgcaactgcgagcagtgcaagcccttctacttc
cagcaccccgagagagacctgcgggaccccgacgtctgcgagccttgcaactgtgaccca
gctggctcccagaatggtgggatctgtgaccgctacaccgatttctccaccggcctcatt
gccggacagtgccgttgtaaattatttgtcgagggggagcgttgtgacctctgcaaagaa
ggtttctatggcctgagtgccgatgacccagcgggctgtcagtcttgtgcctgtaatcct
ctgggtacccaccccgggggcaatccttgtgatccggagacaggaaactgctattgtaag
cgtctggtgacaggaaagcagtgcaatcaatgtctgcccgagcactggggcctgagcaat
gacatggacgggtgccggccgtgcgactgcgaccagggcggagcgctgaacaacaactgc
tcaagtgaatctggccaatgcgaatgccggccccacatgtttggacgtcagtgcaaccag
gtggagcctggctattacttcatttcactggatcattacatctacgaggcagaggaagcc
aacttgggccctggagtgaacataatagagcgccaatacactccagaccgcacgccgtca
tggacaggcataggatttgtgagagtccctgaggggggacacctggaattctacattgac
aacatcccctactccatggagtatgatgttgtgatccgctacgagccgcagttgcctgat
cagtgggaaaaagctgtgatcagtgtcacacgcccaggcaagattcccacaggcagtcgg
tgtggcaacacagttcctgatgacgataatcaagtggtctcactgtcacctggatccaga
tacgttgttctcccgcggcccgtgtgcttcgagaaggggctgaactacaccatccgcctg
gagctgtcccagtactcctcggtggacacggagactgagaacccctacacactcattgac
tctcttgttctcatgccatactgcaaatcgctggacatattcacagtgggaggctcgggc
gaagacgtggtcacgaacagcgcttgggaaactttccaaagataccggtgtttggaaaac
agcaggagtgttgtgaaaactcccatgacagatgtctgcaagaacataatattcagcatt
tctgcactactgcatgagactgccttatcatgccagtgtgacccacagggctccctgagt
tcggtgtgtgaccccaatggaggacagtgccagtgtcgtcccaatgttgttggaaggcag
tgtgacagatgtgcccctggcaccttcgggttcgggccgagtggatgccgaccgtgtgag
tgccatgcccgaggctcttacaacgccttctgcgatgtggagacgggccagtgccactgc
ttccccggggtgtatgggcggcagtgcgaccgctgcctgcccagcttctggggcttcccc
agctgccagccctgccactgcaatggccacgctgacgactgcaacccctacaccggggag
tgcctcagctgccgggaccacacagccggacacaactgtgagaggtgccaggctggctac
tatggagaccccatcctgggatcaggtgaccactgccggccctgcccttgccctgatggc
cccgagagcggacgccagtttgccagtggctgttaccaggatccagtcacactgcaagtc
gtgtgtgtctgtagtgtgggatacataggcagtcgctgtgatgaatgcgcgtctggcttc
tttgggagccccgatgaggtcggtggcgcctgccagccgtgccagtgcaacaacaacatc
gacaccactgaccccgaggcctgcgacaagcggagcggggcgtgcatgaagtgcctctat
cacaccgagggggagaactgccacctctgcagagagggctactacgggagcgccctgcag
caggactgcagaaagtgcgtctgcaactacctgggcacggtgcgggaggactgcgaggac
tcggagagctgtcgctgcgcggcggccacggggcagtgccggtgcctccccaacgtggtg
gggcagacgtgtgaccgctgtgccccccacacgtggcgcctggccagcggcaccggctgc
gagcactgcgactgcgaccccgcacgctccctcgggcctgcctgcaatgagttcacaggg
cagtgccactgcatgccgggttttggaggccggacctgccgggagtgccaggagctcttc
tggggtgacccaagcgtggagtgcttagcatgtgactgcaaccctcgtggcatccagacc
ccgcagtgtgaccgtgccacagggcagtgcatctgcaatgagggggtggaagggctgcac
tgtgacaagtgctccaggggctactctggtgtcttccctgactgcgtgccctgccaccag
tgctttgccctctgggatgtgatcatcagcgagctggctaataggacccagcagttcttg
gacagggctaataccctcaaaatcactggagtcactggcccataccagcagacactcaac
acactggaggagaagctcactgaaattaaaaccatcatcgctcaaaatccagcagccgag
cccttgaagaacattgggaatctcttcgaggaagcagaaaagctgacagcagatgttaca
gttaagatagctgatatagaagaaaacctatcagccttatcagcaaagagcaatagcaca
gacacagacctgagtgcactggagacagatgccaaaagtctggaccacgtcgtgaaagag
cttgcagagcagctagagttcatcaagatctctgatgttcggggagccttggacagtatc
accaagtatttccagatgtcccaggaggcagaggagagggtcaatgcctccaccgttgat
cccgacagcgccgtggagctgtcagcgcggacgcggcaggaagtgcaggccttgatcaac
gagaaggaggcccagttcaaggctaaccaagaggagcagtcgcgccttctggatgaactc
gctgggaagctgcagagcctggatctctctgaggtggctgagaagacgtgtggcagtgcc
ccgggagcctcgtgtgccgagtccgagtgcggggggctgagctgtcggacagacgagggc
aagaagaagtgtggaggccccggctgtgacgggctggtgaccgtggctcacaatgcctgg
cagaaggctatggattttgacagagacatcctcagtgcattagcagaagttgagcaactc
tccagaatggtttctgaggcaaaacagagagcagatgaagcaaaacaaaatgcacaagca
gttttgcttaaaaccaatgctacaaaagaacaagtggacagaagcaatgaagatctgaga
aatcttattaaacagattagagacttcctaatgcaagacagtgctgacctggatagcatt
gaggcagtggctaatgaagtgctgagcatggagatgccaagcactccccagcagctgcag
gccctgacagaagatattcgtgagcgtgtagaaagcctttctgatgttgaggtcattctg
cagcagagtgctggagacattgccagagcagaaatgctattggaggaagctaaaagagca
agcaaaggggcaacagatgttaaagtcactgcagacatggtgaaagcagcactggaagaa
gctgaaaaagctcaaaatgcagctgaaaaagccatcaaacaagctgatgaagatattaaa
ggaactcaagacttgctgacttcgattgaatctgaaaatgtagcatctgcagaaacactg
aacaatgctaccttacgtctgtttgagctagagaagagtgttgaagacctcaggcaaaag
gctgctacaaattcagggactgtgggaaatatagaagacaaaattattagtgcaaaacaa
aatgctgaagaagttcaaaaggtgctcagcagcgagctcagcggcaagtacaggaccgtg
gaggagctcattgccaggaagacagaggagtcggccgaggccaggaggaaagcaggcgtg
ctgcaagatgaagccaaagccttgttggctcaagcaaacagcaaactccagctgctgaaa
gatttggaaaatacatatgaaaacaatcagaaagttctggaagacaaagccaagcagttg
gtggagctggaggagacagttcgctccctcttacagacaatcagccagaaggttgctgtt
tacagcacttgcctgtaa
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integrated database retrieval system
