Zonotrichia leucophrys gambelii (white-crowned sparrow): 135442795
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Entry
135442795 CDS
T09958
Symbol
OPTN
Name
(RefSeq) optineurin isoform X1
KO
K19946
optineurin
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04137
Mitophagy - animal
zle04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135442795 (OPTN)
04137 Mitophagy - animal
135442795 (OPTN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135442795 (OPTN)
Membrane trafficking [BR:
zle04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
135442795 (OPTN)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
135442795 (OPTN)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
135442795 (OPTN)
Xenophagy
Cargo receptors
135442795 (OPTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
EDR4-like_1st
Motif
Other DBs
NCBI-GeneID:
135442795
NCBI-ProteinID:
XP_064559088
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All DBs
Position
1A:complement(65692359..65708730)
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AA seq
553 aa
AA seq
DB search
MSSKSKGRPAENGEHSKSKMENGMDSMAAPALNTYTPEEMVQQMKELITENNELKEAMKL
HNQAMKDRYEELSTWREKQKEEREFYELKFKEAKQCLQAKCIENEQLQQQLQSLKEREEG
AEMEAPEKEVRQLKAQVQRLQAEKADLLAIISELQLKLNISAEDSFVEIGMNEGEINRTA
KEHQENSGEMPSDVAVYIRSKSADESKNLESEELTVSQLLCSLRNETQKREKLEEELQDH
RERLSKLEKETRNCQESGTQTEQEEESSEAVGSEVEALNLQVCALFKELQEAHEKLKEAE
LIQKKLQEKCQVLERKSLAAASELEEKQQLIYTIKKLELQVESMQAEVKLEQAKTHEEKT
RYNNLQDSYSKLLPELTEAKKKIDEMKLKELDRVDKAVVEQLTAKVELAEQALAAKQLQI
DEMKQLIAKQEEDLETMSVLRAQMEVYCSDFHAERAAREKIHEEKEQLAVQLAYLLKEQQ
NFEDLGRSSLAEMQSRHGARMPDGERSPRLVQRGTNSQDWPEQRNISIYACPKCEEILPD
LDTLQIHVMDCIN
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaagtcgaagggccgtcctgctgaaaatggagagcattccaagagtaaaatg
gaaaatggaatggacagcatggcagccccagcccttaacacctacaccccggaagagatg
gtgcaacagatgaaagaactaatcactgagaacaatgagttaaaagaagccatgaagttg
cacaaccaagctatgaaggaccgatatgaggaactttccacttggagagagaagcagaaa
gaagagcgagaattttatgagttaaagtttaaggaggcaaagcagtgcttgcaggccaag
tgcattgaaaatgaacagctacagcagcaacttcagagcctaaaggaaagagaagaagga
gctgaaatggaggctcccgagaaggaggtgaggcagctgaaggcccaggtgcagcggctc
caggctgagaaggcagatctgctcgccatcatttcagagctgcagctcaagctgaacatc
tcagcagaggattcctttgtggagattgggatgaatgaaggggaaataaatagaactgca
aaggaacatcaagagaatagtggtgaaatgcccagtgatgttgctgtctacatcaggagc
aaatctgcagatgaatcgaagaatttggagtctgaggagctaactgtgagccagctgctc
tgcagccttagaaatgaaactcagaagagggaaaaacttgaggaggagctgcaggatcac
agagagagactgtcaaagctggagaaggagaccagaaactgccaggagagtgggacacaa
actgaacaggaagaagagagttcagaagctgttggcagtgaagtagaagccctgaatctg
caagtttgtgctctgtttaaagagcttcaggaagcccatgagaagttaaaagaagcagaa
ttgattcagaagaagcttcaagaaaagtgccaggtactggaaagaaaaagcttggctgct
gcatcagaattggaggagaagcagcagctgatatacaccatcaagaagctggaacttcag
gtggagagcatgcaggcagaggtcaagctggaacaagccaagacacatgaagaaaagaca
agatacaataacctccaggattcatatagcaaactccttccagaactcactgaggcaaag
aaaaaaattgatgaaatgaaactcaaagagctggacagagtagataaagctgtggtggaa
caactgacagcaaaggtggagttggcagaacaagcccttgctgcaaagcagctccagata
gatgaaatgaagcagctaattgctaagcaagaggaggaccttgaaactatgtctgtgctc
cgtgctcagatggaggtttattgttctgatttccatgctgagagggcagcaagagagaag
atccatgaggagaaggagcagttggctgtccagctggcatacctactaaaagagcaacaa
aattttgaagaccttggccgaagctctctggcagagatgcagagtcgccatggagccagg
atgccggatggggagcgctcacctcgccttgtccaaagaggaaccaatagtcaagactgg
ccagagcagcggaatatttctatttatgcatgtcctaaatgtgaagaaattctacctgat
ttggacacactgcagattcatgttatggactgcattaattga
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