Zonotrichia leucophrys gambelii (white-crowned sparrow): 135443235
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Entry
135443235 CDS
T09958
Symbol
IRX4
Name
(RefSeq) iroquois-class homeodomain protein IRX-4
KO
K24889
iroquois-class homeodomain protein IRX
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135443235 (IRX4)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
135443235 (IRX4)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MCM_bind
Motif
Other DBs
NCBI-GeneID:
135443235
NCBI-ProteinID:
XP_064559523
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All DBs
Position
2:complement(89327104..89336396)
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AA seq
493 aa
AA seq
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MSYPQFGYPYSSAPQFLMSTNSLTTCCESSSRTLAETGAAASAQTPVYCPVYESRLLATA
RHELNSAAALGVYGGPYAGPQGYGNYVTYGTEAPAFYSLNSLEAKDGSGSAHAGIAPAAA
YYPYDHTLSQYQYDRYGTMDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKCSDEKRPYEEEEEEEEEGSQEEAMKSGK
AEEPTGKEEKELELSDLEDLDAAESESSECELRRPFPHPHPLPLPGGSLPPRPAELPAKM
PPPAAAAEEEEEEEAAAERARSCLKTAAEECGPDPLGARQRGCESKMCFQQGQQLLEAKP
RIWSLAHTATSLNQAEYPSCMLKRPGGSAAAAAPAPVSVMDRHQDSPVTNLRNWVDGVFH
DPLFRHSTLNQALSNTTVSWATTKGAILETGALGRAVGNGANVLKGQLSNLAHHDSNKEF
LAFPKSGSKMFCS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagtttggctacccttactcctctgcaccccagttcctgatgagcacc
aactccctgacgacctgctgcgagtccagcagccgcacgctggcggagacgggggcggcc
gcctcggcgcagacgcccgtgtactgcccggtgtacgagagccgcctgctcgccaccgcc
cgccacgagctcaactccgccgccgccctgggcgtctacggcgggccctacgccgggccc
cagggctatggaaactacgtgacctacgggaccgaggctcccgccttctactccctgaac
agtttggaggcgaaggacgggagcggctctgcgcatgcgggtatcgcccccgcggctgcc
tactacccctacgatcacaccctcagccagtaccagtacgacaggtacgggacgatggac
ggcgggacgcggaggaaaaacgccacccgagagacgaccagcacgctgaaggcctggctg
caggagcaccgcaagaacccctaccccaccaagggcgagaagatcatgctggccatcatc
accaagatgaccctcacccaggtctccacctggttcgccaacgcccgccggcggctcaag
aaggagaacaagatgacctggccgccgcggaacaagtgctctgacgagaagcggccctac
gaggaagaggaggaggaggaggaggagggttcgcaggaagaggcgatgaagagcgggaaa
gccgaggaacccacgggcaaggaggagaaggagctggagctcagcgacctggaggacttg
gacgccgccgagtcggagagctcggagtgcgagctgcggcggcccttcccgcacccgcat
ccgctcccgctcccgggcggcagcctcccgccgcggccggccgagctccccgccaagatg
ccgccgcccgccgccgccgcggaggaggaggaggaggaggaggcggcggcagagcgggcg
cggagctgcctgaagacggcggcggaggagtgcggccccgacccgctgggcgcccggcag
cgcggctgcgagtccaagatgtgcttccagcaggggcagcagctgctggaggcgaagccc
aggatttggtccctggcgcacaccgccacctccctcaaccaggccgagtacccctcctgc
atgctgaaacggcccgggggctcggccgccgcagccgctcccgccccggtcagcgtcatg
gacaggcaccaggattcgccggtcaccaacctcaggaactgggtggacggggtgtttcac
gaccccctgttcaggcacagtactttaaaccaagccctgagcaacacaacagtttcctgg
gctaccaccaaaggagccattctggaaacgggcgccttgggacgcgcggtggggaacggc
gccaatgtgctcaaggggcagctctcaaacctggcccaccatgactcaaacaaagagttt
ctggcgtttcccaaatcaggaagcaaaatgttttgttcctaa
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