Zonotrichia leucophrys gambelii (white-crowned sparrow): 135443240
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Entry
135443240 CDS
T09958
Symbol
IRX1
Name
(RefSeq) iroquois-class homeodomain protein IRX-1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135443240 (IRX1)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
135443240 (IRX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
MRP-S32
Motif
Other DBs
NCBI-GeneID:
135443240
NCBI-ProteinID:
XP_064559527
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All DBs
Position
2:90368304..90373633
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AA seq
469 aa
AA seq
DB search
MSFPQLGYPQYLSASQAVYGSDRPGVLAAAAAAAAAAAAASGRPAGAELGSGSAAVTSVL
GMYASPYSAPNYSAFLPYTADLGLFSQMGSQYELKDNPGVHPATFAAHTAPAYYPYGQFQ
YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
LKKENKVTWGSRSKDQEDANLFGSDNEGDPEKNEDDEEIDLESIDIDKIDENDGEQSNEE
EEEKPELLRQSSEEEHLEKEKDLALSGSEGLKPKDTLAMVKEASDNSTRIISPGGPNNLQ
MPSHSKPKIWSLAETATSPDGALKSSPPPPPPPQVNHTSPQIQHPAFLPSHGLYTCQIGK
FHNWTNGAFLTQSSLLNVRSFLGVNHHHAAHHNHHLQAQQQSSVLTATLGALSSDKPSER
TSPKHIERENVPRTDSPPQPLKSPFQPVRDNSLAQQEGTPRILTALPSA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccccagctgggctacccgcagtatctcagcgccagccaggcggtgtacggg
agcgaccggcccggggtgctggccgccgccgccgcagccgccgccgccgccgctgccgcc
tcgggccggcccgcgggcgccgagctgggcagcggctcggccgctgtcacctcggtgctg
ggcatgtacgccagcccctacagcgcccccaactacagcgccttcctgccctacaccgcc
gacctcggcctcttctcccaaatgggctcccagtacgagctgaaagataatccgggtgtc
caccctgctacctttgctgcccacactgcccccgcctattatccctacggacaattccaa
tacggggacccggggcggcccaaaaatgccacccgggagagcaccagcacgctgaaggcc
tggctcaacgagcaccgcaagaacccctaccccaccaagggcgagaagatcatgctggcc
atcatcaccaagatgaccctcacccaggtctccacctggttcgccaacgcccgccggcgg
ctcaagaaggagaacaaggtgacctggggctccaggagtaaggaccaagaagatgcaaat
ctctttgggagtgacaatgagggggaccccgagaagaatgaagatgatgaggaaattgac
ctggagagcatagatatagataaaattgatgagaatgatggggagcagagcaatgaggaa
gaggaggagaagcctgagctcctgagacaaagcagcgaagaggagcacttggaaaaggag
aaggatttggcactgtcagggtctgaagggctgaaacccaaagacacgctggccatggtg
aaggaggcctctgacaatagcacgagaatcatcagtcctgggggaccgaacaatttacag
atgccatctcacagcaaacccaagatttggtctttggcagagacagcaacgagtcctgat
ggtgccctgaaatcttctcctcctccgccccctcctccccaggttaaccacacttctcct
cagattcagcaccccgcttttctccctagccatggactctacacatgccagattggcaaa
tttcacaactggacaaatggggctttcctcactcagagttcccttctaaatgtgaggtcc
tttttgggagtaaatcaccaccatgctgctcatcacaatcaccacctccaggcccagcaa
caatcttctgttttaacagcaaccctgggagcgctaagcagcgacaaaccttcagagagg
accagtcccaaacacatagaaagagaaaatgtaccaagaactgactccccaccccagccg
ctaaaatcgcccttccagcctgtccgtgacaactctttggctcagcaagagggaacgccg
agaattttaacagctctcccttctgcttga
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