Zonotrichia leucophrys gambelii (white-crowned sparrow): 135443615
Help
Entry
135443615 CDS
T09958
Symbol
ITGB1
Name
(RefSeq) integrin beta-1 isoform X1
KO
K05719
integrin beta 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03271
Virion - Rotavirus
zle04145
Phagosome
zle04510
Focal adhesion
zle04512
ECM-receptor interaction
zle04514
Cell adhesion molecules
zle04530
Tight junction
zle04810
Regulation of actin cytoskeleton
zle04820
Cytoskeleton in muscle cells
zle05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
135443615 (ITGB1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135443615 (ITGB1)
04514 Cell adhesion molecules
135443615 (ITGB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
135443615 (ITGB1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
135443615 (ITGB1)
04530 Tight junction
135443615 (ITGB1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
135443615 (ITGB1)
04810 Regulation of actin cytoskeleton
135443615 (ITGB1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
135443615 (ITGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135443615 (ITGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zle04147
]
135443615 (ITGB1)
04515 Cell adhesion molecules [BR:
zle04515
]
135443615 (ITGB1)
04090 CD molecules [BR:
zle04090
]
135443615 (ITGB1)
Membrane trafficking [BR:
zle04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
135443615 (ITGB1)
Exosome [BR:
zle04147
]
Exosomal proteins
Proteins found in most exosomes
135443615 (ITGB1)
Cell adhesion molecules [BR:
zle04515
]
Integrins
Integrin beta subunits
135443615 (ITGB1)
CD molecules [BR:
zle04090
]
Proteins
135443615 (ITGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
135443615
NCBI-ProteinID:
XP_064560058
LinkDB
All DBs
Position
2:15225442..15269249
Genome browser
AA seq
806 aa
AA seq
DB search
MAETNFKWLTCAGVLCCLIWNGFAQQGGSDCIKANAKSCGECIQAGPNCGWCKKTDFLQE
GEPTSARCDDLAALKSKGCPMEDIENPRGSKQVLENREVTNRKKGAAEKLKPEAITQIQP
QKLSLHLRVGEPQTFSLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTALMFEMEKI
TSDFRIGFGSFVEKTVMPYISTTPAKLRNPCTGDQNCTSPFSYKNVLSLTSEGNKFNELV
GKQHISGNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLP
NDGKCHLENNVYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQAVYKELKNLIPKSA
VGTLSSNSSNVIQLIIDAYNSLSSEVILENTKLPKGVTISYKSFCKNGVNDTQEDGRKCS
NISIGDEVRFEINITANECPKKEQNETIKIKPLGFTEEVEINLQFICECQCQSEGEPNSP
ACHAGNGTFECGACRCNEGRIGRLCECSTDEVNSEDMDAYCRRENSTEICSNNGECICGQ
CVCKKRENTNEVYSGKYCECDNFNCDRSNGLICGGNGICKCRVCECFPNFTGSACDCSLD
TTPCMASNGQICNGRGTCECGTCNCTDPKFQGPTCEMCQTCLGVCAEHKDCVQCRAFDKG
EKKETCSQECMHFNMTRVESRDKLPQPGQPDPLSHCKEKDVDDCWFYFTYSVNSNGEANV
HVVETPECPSGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKW
DTQENPIYKSPINNFKNPNYGRKAGL
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggccgagactaatttcaagtggctcacatgtgctggcgtcctctgttgcttgatatgg
aatggatttgcccagcagggtggaagcgactgcataaaagcaaatgcaaagtcatgtggg
gaatgtatacaagcaggaccaaactgtggttggtgtaaaaaaactgactttttgcaagaa
ggagagccaacatctgcccgctgtgatgacttggcagcactgaagagtaaaggctgcccc
atggaagatatagagaaccccagaggcagcaaacaggtgctcgaaaatagagaagtaaca
aatcgtaagaaaggtgctgcagagaagctgaaaccagaagccattacacagatccagcca
cagaaattatcactgcatctaagagttggggaaccccagacattttcattaaaattcaag
agagctgaagactaccccattgacctttattatcttatggacctctcctattctatgaaa
gatgatttagagaatgtgaaaagtctcggaacagctctgatgtttgagatggaaaaaata
acttcagactttcggattggctttggctcttttgtggagaaaactgtgatgccttatata
agtacaacaccagccaaactcagaaatccttgtacaggggaccagaactgtacaagtcca
tttagctataaaaatgtgctcagccttaccagtgaaggaaacaagttcaatgaacttgta
ggtaaacagcacatttctgggaacttagattctcctgaaggtggatttgatgcaataatg
caggttgcagtttgtggggaacaaattggctggaggaatgttacaagactattagtgttt
tccacggatgctggtttccactttgcaggagatggtaaacttggtggaattgttctgcca
aatgatgggaaatgtcatctggaaaataatgtgtacacaatgagccactattacgattat
ccctctattgctcatctggtacaaaaacttagtgagaacaatattcagacaatctttgct
gttactgaagagtttcaggcagtctataaggaactgaaaaatctgataccaaaatcagca
gtaggaacattgtcttcaaattccagcaatgtgatccagctgatcattgatgcatacaat
tccctttcttcagaggttatcctggaaaatactaagctaccaaaaggagtgacaatcagt
tacaagtctttctgcaagaatggagtgaatgacacacaagaagatggaaggaagtgttct
aacatttctattggagatgaggttagattcgagattaatataacagctaatgaatgtcca
aagaaagaacaaaatgaaacaattaaaattaaacccctgggattcactgaagaagttgaa
attaatcttcagttcatctgtgagtgtcagtgtcagagtgaaggagaacctaatagtcca
gcctgccatgcaggaaatggaacatttgaatgtggtgcctgcagatgtaatgaaggacga
atcggaagactatgtgaatgtagcacagatgaagtaaatagtgaggatatggatgcttac
tgcaggagggagaacagcacagaaatctgcagtaacaatggagaatgcatttgtggacaa
tgtgtgtgcaagaaaagggagaacaccaatgaggtgtattctggcaaatactgtgaatgt
gacaacttcaactgtgatcgatcaaatggtttgatctgtggaggaaatggaatctgcaag
tgcagagtgtgtgagtgtttccccaacttcactggcagcgcctgcgattgttccttggat
actacaccgtgtatggcatcaaatgggcagatttgcaatggaagaggaacctgtgaatgt
ggcacctgtaactgtacagatcccaaattccaaggccccacctgtgaaatgtgtcagact
tgcctcggtgtctgtgcagagcacaaggactgtgttcagtgcagagcttttgacaagggt
gagaagaaggagacgtgttcgcaggagtgcatgcacttcaacatgacgcgcgtggagagc
cgcgacaagctgccgcagcccggccagcccgaccccctgtcccactgcaaggagaaggac
gtggatgactgctggttctacttcacttactctgtcaactccaatggtgaagccaatgtc
cacgtggtggagaccccagaatgccccagtggtcctgacatcattcccattgtagctggt
gtggttgctggaattgttcttattggacttgcattattattgatttggaaactactaatg
atcattcatgacagaagagaatttgctaaatttgaaaaggagaagatgaatgccaagtgg
gatacgcaagaaaatccaatatacaagagccctattaacaatttcaagaatccaaactat
ggacgtaaagctggtctctaa
DBGET
integrated database retrieval system
