Zonotrichia leucophrys gambelii (white-crowned sparrow): 135443620
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Entry
135443620 CDS
T09958
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135443620 (ZEB1)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
135443620 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-met
zf-C2H2_15
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2HE
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
135443620
NCBI-ProteinID:
XP_064560077
LinkDB
All DBs
Position
2:complement(15610247..15743992)
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AA seq
1112 aa
AA seq
DB search
MADGPRCKRRKQPNPRRNNVTNYNNVVEANSDSDDEDKLHIVEEESVTDAADCDASVPED
DLPTDHIVLPENSEREASTNTCWEDEAGKERKEILGPEAQTDEIGCTVKEDECDSDAENE
QNHDPNVEEFLKQEDTAVIYPEAPEEDQRQGTPEASGQDENGTPDAFSQLLTCPYCDRGY
KRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLDRHMTSHKSGRDPRHVTQSSGNRK
FKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLMPVN
GRARSGLKMSQCSSPSLSASPGSPARPQIRQKIENKPLQEQLPLNQIKTEPVDYEFKPIV
VASGINCSNPLQNGVFSGGSPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVA
VDGNVIRQVLENNHANLASKEQETINNASIQQAGHSLISAISLPLVDQDGTTKIIINYSL
EQPSQLQVVPQNLKKENSVPANSCKNEKLPQDLTVKSEKDKNFEGETNDSTCLLCDDCPG
DLNALQELKHYETKSPPQLPQPSGAEAEKPESPVPSETGENNLSPGQPPLKNLLSLLKAY
YALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQAGQISVQSSGPSSPEQVKLSSPTDND
DQAATSNVSEPQNGTSNSQNPGSTTKSQTLPGASTLNGSHSSTPSASPLNLSSSRNSQGY
TYTAEGVQEEPQIEPLDLSLPKQHGELLERSTITSVYQNSVYSVQEEPLNLTCAKKEPQK
DNSVTDSDPIVNVIPPSANPINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIP
QVAYAYSTTVSPAVHETPPKQIQANGNQDERQDTSSEGISNLEDQNDSDSTPPKKKMRKT
ENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICTKAFKHKHHLIEHMRLHSGEKP
YQCDKCGKRFSHSGSYSQHMNHRYSYCKREPEERDSAEPEELGPEALSSEHALPRASPSQ
IDSDERESLTREEEEFSEKEEEEEEEKDIEGLQEEKECRELQEVGDAEEVAAVEEEEGKT
EGDKNDEVVNQASNAEPEVIQNNGQVSEENNE
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcaggaagcagccgaacccgcgccgcaacaacgta
accaattataacaatgtggtagaagcaaactcagactcagatgatgaagataaattgcat
atagtggaagaggaaagtgtaacagatgcagcagactgtgatgctagtgtgccagaagat
gacttgccaacggaccatatagtgttaccagaaaacagtgaaagagaagcgagtacaaac
acttgttgggaagatgaagctggaaaagaaagaaaggaaatcctggggcctgaagctcag
acagatgaaattggatgtacagtaaaagaagatgaatgtgattctgatgcagagaatgag
caaaaccatgaccctaatgttgaagaattccttaaacaagaagatacagctgttatctac
cctgaagcacctgaggaggaccagagacaaggcacgccagaagccagtggtcaggatgaa
aatggaactcctgacgcgttttcccagctgctcacatgcccgtactgcgaccggggatac
aaacgcttcacctctctgaaggaacacatcaaataccgccatgaaaagaacgaggataac
ttcagctgctccttgtgcagctacacctttgcgtacagaacgcagcttgaccgccacatg
acatcacacaaatcaggaagagacccaagacatgtgacgcagtccagcggtaatcgaaaa
ttcaagtgcactgaatgtggaaaagcttttaaatataaacatcacctaaaggagcatcta
cgaatccacagtggagagaagccatatgagtgcccaaactgcaagaaacgtttttcccat
tctggttcatacagttcacacataagcagtaagaagtgtattggtttgatgcccgtgaat
ggtcgagcccggtcagggctcaagatgtctcagtgctcctccccttccctttctgcatca
ccaggtagcccagcaagaccacagatacgacaaaagatagaaaataaacccttgcaagag
cagcttcctcttaaccaaattaaaactgaacctgtggattatgaattcaagcccatagtg
gttgcttcaggaattaattgttcaaaccctttgcaaaatggggtttttagtggtggtagc
ccattgcaggcaaccagttctcctcagggtgtggtgcaagctgttgttctaccaacagta
ggtctggtgtctcccataagcatcaatttaagtgacattcaaaatgtactaaaagtggca
gtggatggtaatgtaatcaggcaagtactggaaaacaatcatgctaatcttgcgtccaaa
gaacaagaaacaatcaacaatgcatctatacaacaagctggccattccctcatttcagct
atcagtcttcctttggttgaccaagatgggacaaccaaaattatcatcaactacagcttg
gagcagccaagtcaacttcaggttgttccacaaaatctaaaaaaagaaaactctgttcct
gcaaatagttgcaaaaatgaaaaattaccacaagatctcacagtgaagtctgagaaagat
aagaactttgaaggagagaccaacgatagcacttgtcttctttgtgatgactgtccagga
gatcttaatgcacttcaagaattaaagcactatgaaacaaaaagccctcctcagcttccc
cagcccagtggagcagaagctgagaaacccgagtcccctgtcccatcagaaaccggggag
aacaacttgtctcccggtcagccacctttaaagaaccttctgtcgctcctaaaagcctat
tatgcattaaatgcacaaccaagtgcagaagagctttccaaaatagcagattctgtaaac
ctaccactggatgtggtaaaaaagtggtttgaaaaaatgcaagctggacagatttctgtg
cagtcttctggaccatcttctcctgaacaagttaaattaagcagccccacagacaacgat
gatcaagcagcaacttcaaatgtgagcgaaccccagaatggcacaagtaactcacaaaat
cctggcagtacaacaaaatctcagactttaccaggggcttcaactctgaatggttcacac
agtagcacgccatctgcatcaccactaaacctttcttcatcaagaaattcacagggttac
acgtacacggcagagggtgtacaagaagagccacaaatagaacctcttgacctttcgcta
ccaaagcaacatggagagctgttggaaagatctaccataactagtgtttaccagaacagt
gtttattctgtccaagaagaacctttgaacttaacttgtgcaaaaaaagaaccacaaaag
gacaacagtgttacagactctgatcctattgtaaatgtaatcccaccaagtgccaatccc
ataaatattgctatacctacagtcactgcccagttacctacaattgttgccattgctgac
cagaacagtgttccctgcttgagagctctcgctgccaataagcaaaccattttgattcca
caggtggcttatgcatactctactacagttagtcctgcagttcatgagacaccaccaaaa
cagatccaagccaatggaaatcaggatgaaaggcaagacactagctcagaaggaatatcc
aatttagaagatcaaaatgattctgattcaacacccccaaagaaaaaaatgagaaagaca
gaaaatgggatgtatgcatgtgatttatgtgacaaaatattccagaagagcagctcgtta
ttgagacataagtatgaacacacaggtaaaagacctcacgagtgtggaatctgtacgaaa
gcatttaaacacaaacaccatttgatcgaacacatgcgactgcattctggggaaaagccc
taccaatgtgacaagtgtggaaagaggttttcccactcgggctcttactctcagcacatg
aaccatcgctactcctactgcaaaagggagcccgaggagcgcgacagcgccgagcccgag
gagctgggccccgaggcgctgagcagcgagcacgccctgcccagggcgtccccctcgcag
atcgactctgatgagagggagagcctgaccagggaggaggaggaattcagtgaaaaagag
gaagaggaggaggaagaaaaagacatagagggacttcaggaagaaaaagaatgtagggaa
ctacaagaagtaggggatgcggaagaagtagcagcagtagaagaggaagaagggaaaact
gaaggtgacaagaatgatgaagttgtaaatcaagcaagcaatgcagaaccagaagttata
caaaataatgggcaggtgtcagaagaaaataatgaataa
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integrated database retrieval system
