Zonotrichia leucophrys gambelii (white-crowned sparrow): 135443691
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Entry
135443691 CDS
T09958
Symbol
NYX
Name
(RefSeq) nyctalopin
KO
K08129
nyctalopin
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
zle00535
]
135443691 (NYX)
Proteoglycans [BR:
zle00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
135443691 (NYX)
BRITE hierarchy
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRRNT
DHU1_N
DUF5886
Herpes_glycoH_C
Motif
Other DBs
NCBI-GeneID:
135443691
NCBI-ProteinID:
XP_064560309
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Position
1:complement(8174030..8179745)
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AA seq
473 aa
AA seq
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MFAIILNVILWVPQAHGAWACVRSCPPSCVCTPERSCSVRCDRAGLGQIPSEFPCEASSI
NLDKNSIKFLSERAFGTLPSLKSLSLNHNNISFITPGAFKGLPSLTELRMAHNEYIRYLH
TRTFTALRRLVRLDLANCNLFNIPDRIFIELPALQELFCFQNNFRRIPGAIRGMENLTHV
YLERNRIEAVAYNSLQGLTKLKYLNLQDNKINVIHERAFQGCQRMEYLYLNDNLISELPE
NSFDGLRRLKMLNLGGNFLRNISNTWFRDLGELEFLYLDRNRISYIEEGAFENLTSLVAL
HLNSNNLTTLPFSVFEPVYFLGRLYLFRNPWECDCRLEWLKEWMENYRLVRDIPCASPSS
VAGIDLTDVLFERSPEGFCLDPEELNVTSERPTPSEEPWPTTESKFNSLISKLLLQMGLP
EEVANATEVYSNSTQPDGQTEGVSSGVGEDRTEAGSCSLYLPALLAVIVLLCK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccatcattctaaatgtgatcctttgggtcccccaggcgcatggggcgtgggcc
tgcgtgcgctcctgccctcccagctgcgtgtgcaccccggagcggagctgctccgtgcgc
tgcgaccgcgccggcctgggccagatccccagcgagttcccctgcgaggcctcctccatc
aacctggataaaaacagcatcaagttcctgtccgagagggccttcggaacgctgccttcc
ctcaagtccctgtccctgaaccacaacaacatctccttcatcacgccgggcgccttcaag
gggctgcccagcctgacggagctgaggatggcccacaacgagtacatccgctacctgcac
acccgcaccttcactgcgctgcgccgcctcgtcaggctggacctggccaactgcaacctc
ttcaacatcccagacaggatcttcatcgagctgcctgctctgcaggaactcttctgcttc
cagaacaacttccgaaggatcccaggtgccatcaggggcatggagaacttgacccatgtg
tacctggagaggaacaggattgaagcggtggcctacaactccctgcagggcctgaccaag
ctgaaatacctgaatctgcaggacaacaagataaatgtcatccacgagcgagcttttcag
ggctgtcagaggatggagtacctgtacctgaatgacaacttgatcagtgagcttccagaa
aactcctttgatggcctgaggcgcctgaagatgctcaacctgggggggaattttctcagg
aacatttccaacacctggttccgggacttgggggagctggagttcctctacctggaccgc
aacaggatcagctacattgaggaaggggcttttgagaacctcaccagcctggtggctctg
cacttgaacagcaacaacctgacaacgctgcccttctccgtgttcgagcccgtgtacttc
ctgggccgcctgtacctcttccgcaacccctgggagtgcgactgccgcctcgagtggctc
aaggagtggatggagaactacaggctggtcagggacatcccgtgtgcctccccctcctcg
gtggcaggcattgatctgacggacgtgctctttgagaggtctcccgaaggtttctgtctg
gacccggaggagctgaacgtcacatctgaacggccgacgcccagcgaggagccttggccc
accacagagagcaagttcaacagccttatctccaaactcctgctccagatgggccttccc
gaagaggtggcaaacgccactgaagtgtacagtaacagcacacagccagacggacagact
gaaggggtttcttctggcgtgggggaggacagaaccgaggctggctcctgttccttgtac
ctcccagcacttctggcagtgattgttctgctgtgcaaatag
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