Zonotrichia leucophrys gambelii (white-crowned sparrow): 135443734
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Entry
135443734 CDS
T09958
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135443734 (VPS50)
Membrane trafficking [BR:
zle04131
]
Protein recycling
Others
EARP complex
135443734 (VPS50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
135443734
NCBI-ProteinID:
XP_064560376
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All DBs
Position
2:24684971..24766403
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AA seq
965 aa
AA seq
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MQKIKSLMTRQGLRSPQESVNDLSPIENLRIPTKEELRELHEEPPDPQAQQEIINSIEEV
YFSNDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVEELE
RVTSLQSGLQLAAVICTNGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEAAVVSSD
GNNVIGTEENSFDRNYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLDVI
SRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSSFS
ILQLHEFKFLEQSRSPSVSPSKQPASAASSAVTLFQQYCAAGNPFEIQADSKDDETEDVL
ASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPIKSVSRETLRSRKRSDYNL
NKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRNDM
FESTGLGLSSSRLRTTLNRIQESLIDLEVSADPSGTLTAAEERKEKVPSPHLSHLVVLTS
GNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELRKP
VYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNVYVDALLKEFEEFNRRLNDVSKRVRI
PLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPD
KEFVETYIKAYYLTENDMESWIKEHREYSTKQLTNLVNICLGTYINKKARQKLLATIDDT
DRPKR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccgccagggtctacgaagtcctcaggagagtgtt
aatgacctcagtcctattgaaaacttacggattcctactaaggaggagctcagagaacta
catgaagaaccacctgatcctcaggcacaacaggaaataattaacagcattgaagaagtt
tatttttccaatgactcctttgatattgtgaagtatgagttagagaggcttcctccagta
cttagtcttcaagaactggaagagtacagagacaaactaaaacaacagcaagctgctgta
tctaagaaagttgcagatttaatccttgaaaaacagcctgcatatgttgaggagcttgaa
cgtgttacatcattgcagagtggccttcagctggcggcggttatttgcacaaatggaaga
agacacctgaatatagcaaaggaagggttcacacaaactagtttggggctccttgcaaat
cagaggaaacgacagttgcttattggactgctaaaatctctgagaacaataaaaacactg
caaagaactgatgtgcgtttgagtgagatgttggaggaggaagattatccaggagctatt
caactatgcttggaatgccagaaagctgccagcactttcaaacactacagttgtataagt
gagttaaattcaaaactgcaagacaccttggaacaaatagaggaacaattggacgtagca
ctttccaaaatatgcaagaattttgatatcaatcattatacaaaggttcagcaggcttac
aggctgcttggaaaaacacagacagcaatggaccagttacatatgcacttcacccaagcc
attcacaacactgtgtttcaagtagtccttggatatgtggagctgtgtgcaggaaacaca
gacaccaagttccagaagttacagtacaaagacctctgtacacacatcacatcagacagc
tacattccatgccttgctgatctctgcaaagccctctgggaagtcatgctcagttactac
cgaacgatgcagtggcatgagaaccatgaccaagatgaggcagcggttgtgtcttctgat
ggcaacaatgtgattggaactgaagagaacagttttgaccgcaactatgtaaaaaagaaa
ttggagcatgggctttcacgaatatggcaggatgttcagttgaaagtgaaaacatatctt
ctgggaacagatttgtctaacttcaaatatgatgacttcatatttgtacttgatgttatc
agcaggctgatgcaagttggagaagaattttgtggcagcaagtctgaagttttgcaagaa
tctatcagaaaacaaagtgttaactatttcaaaacataccacagaacccgtcttgaggaa
ctaagaatgtttttggagaatgagacctgggaactttgtcctgttaaatcaagctttagt
attttgcagcttcacgaatttaagttcctggagcagtcgcgttccccgtcggtgtcgccg
agcaagcagccagcctctgcggcgtcatcggccgtcacgctgttccagcagtactgcgcc
gccggaaaccccttcgaaatccaggctgacagcaaggatgatgagacagaggatgtgcta
gcttccaatgggtatgaatcagatgaacaagaaaaaagtgcatatcaagagtatgatagt
gacagtgatgttcctgaagagttgaaaagagattatgtggatgagcagacaggagatgcc
ccaattaaaagtgtttctcgagaaactctgaggagcagaaagagatcagattataacctc
aataaagtgaatgcacctattctaaccaacactacgctgaatgtaataaggcttgttggg
aaatacatgcagatgatgaatattctgaagcctattgcatttgatgtgatccacttcatg
tcccagctctttgattactatctgtatgcagtctatacattttttggccgaaatgacatg
tttgaatctacaggactgggcctcagcagcagcagattacgcaccacactgaacagaatc
caggagagtctgattgatctggaggtgtctgctgatccttcagggactctcacagctgct
gaagagagaaaagagaaggtgccaagcccacatctcagtcatctcgtagttttgacatct
ggcaattcgctgtatggcttggcagagagagtggtggccacagaatccttggtatttctg
gctgagcagtttgaatttcttcagcctcatcttgatgcagtgatgccagctgccaagaag
ccttttcttcagcagttctattctcagacagtgtcaactgccagtgaactacgtaaacca
gtttattggattgttgctgctaaagccattgactatgaacaaatgcttctactgatggct
aatgtgaaatgggatgtgaaggaaatcatgtcacagcacaatgtatatgtagatgctctt
ttaaaggaatttgaagaatttaacaggaggttgaatgatgtgtctaagagagtccgtatt
ccattgccagtctccaacatcctttgggagcactgcatacgcttggccaatagaaccctt
gtggaaggttatgccaatgtaaagaagtgcagtaatgaaggacgtgccttgatgcagctg
gattttcaacaattcttaatgaaactagaaaagttaacagacattaggcctattccagat
aaagaatttgtggaaacctacattaaagcatactacctgacagaaaatgacatggaatcc
tggataaaagaacatagggaatattccactaagcagctgaccaatctggtgaatatttgt
ctgggcacctacatcaacaaaaaggcgagacagaagctgttagctaccattgatgacaca
gacaggcctaagagataa
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